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Spike pattern recognition by supervised classification in low dimensional embedding space
Epileptiform discharges in interictal electroencephalography (EEG) form the mainstay of epilepsy diagnosis and localization of seizure onset. Visual analysis is rater-dependent and time consuming, especially for long-term recordings, while computerized methods can provide efficiency in reviewing lon...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4883172/ https://www.ncbi.nlm.nih.gov/pubmed/27747608 http://dx.doi.org/10.1007/s40708-016-0044-4 |
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author | Zacharaki, Evangelia I. Mporas, Iosif Garganis, Kyriakos Megalooikonomou, Vasileios |
author_facet | Zacharaki, Evangelia I. Mporas, Iosif Garganis, Kyriakos Megalooikonomou, Vasileios |
author_sort | Zacharaki, Evangelia I. |
collection | PubMed |
description | Epileptiform discharges in interictal electroencephalography (EEG) form the mainstay of epilepsy diagnosis and localization of seizure onset. Visual analysis is rater-dependent and time consuming, especially for long-term recordings, while computerized methods can provide efficiency in reviewing long EEG recordings. This paper presents a machine learning approach for automated detection of epileptiform discharges (spikes). The proposed method first detects spike patterns by calculating similarity to a coarse shape model of a spike waveform and then refines the results by identifying subtle differences between actual spikes and false detections. Pattern classification is performed using support vector machines in a low dimensional space on which the original waveforms are embedded by locality preserving projections. The automatic detection results are compared to experts’ manual annotations (101 spikes) on a whole-night sleep EEG recording. The high sensitivity (97 %) and the low false positive rate (0.1 min(−1)), calculated by intra-patient cross-validation, highlight the potential of the method for automated interictal EEG assessment. |
format | Online Article Text |
id | pubmed-4883172 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-48831722016-08-19 Spike pattern recognition by supervised classification in low dimensional embedding space Zacharaki, Evangelia I. Mporas, Iosif Garganis, Kyriakos Megalooikonomou, Vasileios Brain Inform Article Epileptiform discharges in interictal electroencephalography (EEG) form the mainstay of epilepsy diagnosis and localization of seizure onset. Visual analysis is rater-dependent and time consuming, especially for long-term recordings, while computerized methods can provide efficiency in reviewing long EEG recordings. This paper presents a machine learning approach for automated detection of epileptiform discharges (spikes). The proposed method first detects spike patterns by calculating similarity to a coarse shape model of a spike waveform and then refines the results by identifying subtle differences between actual spikes and false detections. Pattern classification is performed using support vector machines in a low dimensional space on which the original waveforms are embedded by locality preserving projections. The automatic detection results are compared to experts’ manual annotations (101 spikes) on a whole-night sleep EEG recording. The high sensitivity (97 %) and the low false positive rate (0.1 min(−1)), calculated by intra-patient cross-validation, highlight the potential of the method for automated interictal EEG assessment. Springer Berlin Heidelberg 2016-03-16 /pmc/articles/PMC4883172/ /pubmed/27747608 http://dx.doi.org/10.1007/s40708-016-0044-4 Text en © The Author(s) 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Article Zacharaki, Evangelia I. Mporas, Iosif Garganis, Kyriakos Megalooikonomou, Vasileios Spike pattern recognition by supervised classification in low dimensional embedding space |
title | Spike pattern recognition by supervised classification in low dimensional embedding space |
title_full | Spike pattern recognition by supervised classification in low dimensional embedding space |
title_fullStr | Spike pattern recognition by supervised classification in low dimensional embedding space |
title_full_unstemmed | Spike pattern recognition by supervised classification in low dimensional embedding space |
title_short | Spike pattern recognition by supervised classification in low dimensional embedding space |
title_sort | spike pattern recognition by supervised classification in low dimensional embedding space |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4883172/ https://www.ncbi.nlm.nih.gov/pubmed/27747608 http://dx.doi.org/10.1007/s40708-016-0044-4 |
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