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Spike pattern recognition by supervised classification in low dimensional embedding space

Epileptiform discharges in interictal electroencephalography (EEG) form the mainstay of epilepsy diagnosis and localization of seizure onset. Visual analysis is rater-dependent and time consuming, especially for long-term recordings, while computerized methods can provide efficiency in reviewing lon...

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Autores principales: Zacharaki, Evangelia I., Mporas, Iosif, Garganis, Kyriakos, Megalooikonomou, Vasileios
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4883172/
https://www.ncbi.nlm.nih.gov/pubmed/27747608
http://dx.doi.org/10.1007/s40708-016-0044-4
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author Zacharaki, Evangelia I.
Mporas, Iosif
Garganis, Kyriakos
Megalooikonomou, Vasileios
author_facet Zacharaki, Evangelia I.
Mporas, Iosif
Garganis, Kyriakos
Megalooikonomou, Vasileios
author_sort Zacharaki, Evangelia I.
collection PubMed
description Epileptiform discharges in interictal electroencephalography (EEG) form the mainstay of epilepsy diagnosis and localization of seizure onset. Visual analysis is rater-dependent and time consuming, especially for long-term recordings, while computerized methods can provide efficiency in reviewing long EEG recordings. This paper presents a machine learning approach for automated detection of epileptiform discharges (spikes). The proposed method first detects spike patterns by calculating similarity to a coarse shape model of a spike waveform and then refines the results by identifying subtle differences between actual spikes and false detections. Pattern classification is performed using support vector machines in a low dimensional space on which the original waveforms are embedded by locality preserving projections. The automatic detection results are compared to experts’ manual annotations (101 spikes) on a whole-night sleep EEG recording. The high sensitivity (97 %) and the low false positive rate (0.1 min(−1)), calculated by intra-patient cross-validation, highlight the potential of the method for automated interictal EEG assessment.
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spelling pubmed-48831722016-08-19 Spike pattern recognition by supervised classification in low dimensional embedding space Zacharaki, Evangelia I. Mporas, Iosif Garganis, Kyriakos Megalooikonomou, Vasileios Brain Inform Article Epileptiform discharges in interictal electroencephalography (EEG) form the mainstay of epilepsy diagnosis and localization of seizure onset. Visual analysis is rater-dependent and time consuming, especially for long-term recordings, while computerized methods can provide efficiency in reviewing long EEG recordings. This paper presents a machine learning approach for automated detection of epileptiform discharges (spikes). The proposed method first detects spike patterns by calculating similarity to a coarse shape model of a spike waveform and then refines the results by identifying subtle differences between actual spikes and false detections. Pattern classification is performed using support vector machines in a low dimensional space on which the original waveforms are embedded by locality preserving projections. The automatic detection results are compared to experts’ manual annotations (101 spikes) on a whole-night sleep EEG recording. The high sensitivity (97 %) and the low false positive rate (0.1 min(−1)), calculated by intra-patient cross-validation, highlight the potential of the method for automated interictal EEG assessment. Springer Berlin Heidelberg 2016-03-16 /pmc/articles/PMC4883172/ /pubmed/27747608 http://dx.doi.org/10.1007/s40708-016-0044-4 Text en © The Author(s) 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Article
Zacharaki, Evangelia I.
Mporas, Iosif
Garganis, Kyriakos
Megalooikonomou, Vasileios
Spike pattern recognition by supervised classification in low dimensional embedding space
title Spike pattern recognition by supervised classification in low dimensional embedding space
title_full Spike pattern recognition by supervised classification in low dimensional embedding space
title_fullStr Spike pattern recognition by supervised classification in low dimensional embedding space
title_full_unstemmed Spike pattern recognition by supervised classification in low dimensional embedding space
title_short Spike pattern recognition by supervised classification in low dimensional embedding space
title_sort spike pattern recognition by supervised classification in low dimensional embedding space
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4883172/
https://www.ncbi.nlm.nih.gov/pubmed/27747608
http://dx.doi.org/10.1007/s40708-016-0044-4
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