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Novel bioinformatic developments for exome sequencing

With the widespread adoption of next generation sequencing technologies by the genetics community and the rapid decrease in costs per base, exome sequencing has become a standard within the repertoire of genetic experiments for both research and diagnostics. Although bioinformatics now offers standa...

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Autores principales: Lelieveld, Stefan H., Veltman, Joris A., Gilissen, Christian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4883269/
https://www.ncbi.nlm.nih.gov/pubmed/27075447
http://dx.doi.org/10.1007/s00439-016-1658-6
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author Lelieveld, Stefan H.
Veltman, Joris A.
Gilissen, Christian
author_facet Lelieveld, Stefan H.
Veltman, Joris A.
Gilissen, Christian
author_sort Lelieveld, Stefan H.
collection PubMed
description With the widespread adoption of next generation sequencing technologies by the genetics community and the rapid decrease in costs per base, exome sequencing has become a standard within the repertoire of genetic experiments for both research and diagnostics. Although bioinformatics now offers standard solutions for the analysis of exome sequencing data, many challenges still remain; especially the increasing scale at which exome data are now being generated has given rise to novel challenges in how to efficiently store, analyze and interpret exome data of this magnitude. In this review we discuss some of the recent developments in bioinformatics for exome sequencing and the directions that this is taking us to. With these developments, exome sequencing is paving the way for the next big challenge, the application of whole genome sequencing.
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spelling pubmed-48832692016-06-06 Novel bioinformatic developments for exome sequencing Lelieveld, Stefan H. Veltman, Joris A. Gilissen, Christian Hum Genet Review With the widespread adoption of next generation sequencing technologies by the genetics community and the rapid decrease in costs per base, exome sequencing has become a standard within the repertoire of genetic experiments for both research and diagnostics. Although bioinformatics now offers standard solutions for the analysis of exome sequencing data, many challenges still remain; especially the increasing scale at which exome data are now being generated has given rise to novel challenges in how to efficiently store, analyze and interpret exome data of this magnitude. In this review we discuss some of the recent developments in bioinformatics for exome sequencing and the directions that this is taking us to. With these developments, exome sequencing is paving the way for the next big challenge, the application of whole genome sequencing. Springer Berlin Heidelberg 2016-04-13 2016 /pmc/articles/PMC4883269/ /pubmed/27075447 http://dx.doi.org/10.1007/s00439-016-1658-6 Text en © The Author(s) 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Review
Lelieveld, Stefan H.
Veltman, Joris A.
Gilissen, Christian
Novel bioinformatic developments for exome sequencing
title Novel bioinformatic developments for exome sequencing
title_full Novel bioinformatic developments for exome sequencing
title_fullStr Novel bioinformatic developments for exome sequencing
title_full_unstemmed Novel bioinformatic developments for exome sequencing
title_short Novel bioinformatic developments for exome sequencing
title_sort novel bioinformatic developments for exome sequencing
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4883269/
https://www.ncbi.nlm.nih.gov/pubmed/27075447
http://dx.doi.org/10.1007/s00439-016-1658-6
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