Cargando…

Functional and Structural Analyses of CYP1B1 Variants Linked to Congenital and Adult-Onset Glaucoma to Investigate the Molecular Basis of These Diseases

Glaucoma, the leading cause of irreversible blindness, appears in various forms. Mutations in CYP1B1 result in primary congenital glaucoma (PCG) by an autosomal recessive mode of inheritance while it acts as a modifier locus for primary open angle glaucoma (POAG). We investigated the molecular basis...

Descripción completa

Detalles Bibliográficos
Autores principales: Banerjee, Antara, Chakraborty, Subhadip, Chakraborty, Abhijit, Chakrabarti, Saikat, Ray, Kunal
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4887111/
https://www.ncbi.nlm.nih.gov/pubmed/27243976
http://dx.doi.org/10.1371/journal.pone.0156252
_version_ 1782434697340518400
author Banerjee, Antara
Chakraborty, Subhadip
Chakraborty, Abhijit
Chakrabarti, Saikat
Ray, Kunal
author_facet Banerjee, Antara
Chakraborty, Subhadip
Chakraborty, Abhijit
Chakrabarti, Saikat
Ray, Kunal
author_sort Banerjee, Antara
collection PubMed
description Glaucoma, the leading cause of irreversible blindness, appears in various forms. Mutations in CYP1B1 result in primary congenital glaucoma (PCG) by an autosomal recessive mode of inheritance while it acts as a modifier locus for primary open angle glaucoma (POAG). We investigated the molecular basis of the variable phenotypes resulting from the defects in CYP1B1 by using subclones of 23 CYP1B1 mutants reported in glaucoma patients, in a cell based system by measuring the dual activity of the enzyme to metabolize both retinol and 17β-estradiol. Most variants linked to POAG showed low steroid metabolism while null or very high retinol metabolism was observed in variants identified in PCG. We examined the translational turnover rates of mutant proteins after the addition of cycloheximide and observed that the levels of enzyme activity mostly corroborated the translational turnover rate. We performed extensive normal mode analysis and molecular-dynamics-simulations-based structural analyses and observed significant variation of fluctuation in certain segmental parts of the mutant proteins, especially at the B-C and F-G loops, which were previously shown to affect the dynamic behavior and ligand entry/exit properties of the cytochrome P450 family of proteins. Our molecular study corroborates the structural analysis, and suggests that the pathologic state of the carrier of CYP1B1 mutations is determined by the allelic state of the gene. To our knowledge, this is the first attempt to dissect biological activities of CYP1B1 for correlation with congenital and adult onset glaucomas.
format Online
Article
Text
id pubmed-4887111
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-48871112016-06-10 Functional and Structural Analyses of CYP1B1 Variants Linked to Congenital and Adult-Onset Glaucoma to Investigate the Molecular Basis of These Diseases Banerjee, Antara Chakraborty, Subhadip Chakraborty, Abhijit Chakrabarti, Saikat Ray, Kunal PLoS One Research Article Glaucoma, the leading cause of irreversible blindness, appears in various forms. Mutations in CYP1B1 result in primary congenital glaucoma (PCG) by an autosomal recessive mode of inheritance while it acts as a modifier locus for primary open angle glaucoma (POAG). We investigated the molecular basis of the variable phenotypes resulting from the defects in CYP1B1 by using subclones of 23 CYP1B1 mutants reported in glaucoma patients, in a cell based system by measuring the dual activity of the enzyme to metabolize both retinol and 17β-estradiol. Most variants linked to POAG showed low steroid metabolism while null or very high retinol metabolism was observed in variants identified in PCG. We examined the translational turnover rates of mutant proteins after the addition of cycloheximide and observed that the levels of enzyme activity mostly corroborated the translational turnover rate. We performed extensive normal mode analysis and molecular-dynamics-simulations-based structural analyses and observed significant variation of fluctuation in certain segmental parts of the mutant proteins, especially at the B-C and F-G loops, which were previously shown to affect the dynamic behavior and ligand entry/exit properties of the cytochrome P450 family of proteins. Our molecular study corroborates the structural analysis, and suggests that the pathologic state of the carrier of CYP1B1 mutations is determined by the allelic state of the gene. To our knowledge, this is the first attempt to dissect biological activities of CYP1B1 for correlation with congenital and adult onset glaucomas. Public Library of Science 2016-05-31 /pmc/articles/PMC4887111/ /pubmed/27243976 http://dx.doi.org/10.1371/journal.pone.0156252 Text en © 2016 Banerjee et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Banerjee, Antara
Chakraborty, Subhadip
Chakraborty, Abhijit
Chakrabarti, Saikat
Ray, Kunal
Functional and Structural Analyses of CYP1B1 Variants Linked to Congenital and Adult-Onset Glaucoma to Investigate the Molecular Basis of These Diseases
title Functional and Structural Analyses of CYP1B1 Variants Linked to Congenital and Adult-Onset Glaucoma to Investigate the Molecular Basis of These Diseases
title_full Functional and Structural Analyses of CYP1B1 Variants Linked to Congenital and Adult-Onset Glaucoma to Investigate the Molecular Basis of These Diseases
title_fullStr Functional and Structural Analyses of CYP1B1 Variants Linked to Congenital and Adult-Onset Glaucoma to Investigate the Molecular Basis of These Diseases
title_full_unstemmed Functional and Structural Analyses of CYP1B1 Variants Linked to Congenital and Adult-Onset Glaucoma to Investigate the Molecular Basis of These Diseases
title_short Functional and Structural Analyses of CYP1B1 Variants Linked to Congenital and Adult-Onset Glaucoma to Investigate the Molecular Basis of These Diseases
title_sort functional and structural analyses of cyp1b1 variants linked to congenital and adult-onset glaucoma to investigate the molecular basis of these diseases
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4887111/
https://www.ncbi.nlm.nih.gov/pubmed/27243976
http://dx.doi.org/10.1371/journal.pone.0156252
work_keys_str_mv AT banerjeeantara functionalandstructuralanalysesofcyp1b1variantslinkedtocongenitalandadultonsetglaucomatoinvestigatethemolecularbasisofthesediseases
AT chakrabortysubhadip functionalandstructuralanalysesofcyp1b1variantslinkedtocongenitalandadultonsetglaucomatoinvestigatethemolecularbasisofthesediseases
AT chakrabortyabhijit functionalandstructuralanalysesofcyp1b1variantslinkedtocongenitalandadultonsetglaucomatoinvestigatethemolecularbasisofthesediseases
AT chakrabartisaikat functionalandstructuralanalysesofcyp1b1variantslinkedtocongenitalandadultonsetglaucomatoinvestigatethemolecularbasisofthesediseases
AT raykunal functionalandstructuralanalysesofcyp1b1variantslinkedtocongenitalandadultonsetglaucomatoinvestigatethemolecularbasisofthesediseases