Cargando…
The Sp1-mediaded allelic regulation of MMP13 expression by an ESCC susceptibility SNP rs2252070
Metallopeptidase 13 (MMP13), a well-known and highly regulated zinc-dependent MMP collagenase, plays a crucial part in development and progression of esophageal squamous cell carcinoma (ESCC). Therefore, we examined associations between ESCC susceptibility and four haplotype-tagging single nucleotid...
Autores principales: | , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4887914/ https://www.ncbi.nlm.nih.gov/pubmed/27245877 http://dx.doi.org/10.1038/srep27013 |
_version_ | 1782434796875546624 |
---|---|
author | Shi, Meng Xia, Jianhong Xing, Huaixin Yang, Wenjun Xiong, Xiangyu Pan, Wenting Han, Sichong Shang, Jinhua Zhou, Changchun Zhou, Liqing Yang, Ming |
author_facet | Shi, Meng Xia, Jianhong Xing, Huaixin Yang, Wenjun Xiong, Xiangyu Pan, Wenting Han, Sichong Shang, Jinhua Zhou, Changchun Zhou, Liqing Yang, Ming |
author_sort | Shi, Meng |
collection | PubMed |
description | Metallopeptidase 13 (MMP13), a well-known and highly regulated zinc-dependent MMP collagenase, plays a crucial part in development and progression of esophageal squamous cell carcinoma (ESCC). Therefore, we examined associations between ESCC susceptibility and four haplotype-tagging single nucleotide polymorphisms (htSNPs) using a two stage case-control strategy. Odds ratios (OR) and 95% confidence intervals (95% CI) were computed by logistic regression model. After analyzing 1588 ESCC patients and frequency-matched 1600 unaffected controls, we found that MMP13 rs2252070 G > A genetic polymorphism is significantly associated with ESCC risk in Chinese Han populations (GA: OR = 0.63, 95% CI = 0.54–0.74, P = 1.7 × 10(−6), AA: OR = 0.73, 95% CI = 0.66–0.81, P = 1.8 × 10(−6)). Interestingly, the rs2252070 G-to-A change was shown to diminish a Sp1-binding site in ESCC cells. Reporter gene assays indicated that the rs2252070 A allele locating in a potential MMP13 promoter has low promoter activities. After measuring MMP13 gene expression in sixty-six pairs of esophageal cancer and normal tissues, we observed that the rs2252070 A protective allele carriers showed decreased oncogene MMP13 expression. Results of these analyses underline the support of the notion that MMP13 might function as a key oncogene in esophageal carcinogenesis. |
format | Online Article Text |
id | pubmed-4887914 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-48879142016-06-09 The Sp1-mediaded allelic regulation of MMP13 expression by an ESCC susceptibility SNP rs2252070 Shi, Meng Xia, Jianhong Xing, Huaixin Yang, Wenjun Xiong, Xiangyu Pan, Wenting Han, Sichong Shang, Jinhua Zhou, Changchun Zhou, Liqing Yang, Ming Sci Rep Article Metallopeptidase 13 (MMP13), a well-known and highly regulated zinc-dependent MMP collagenase, plays a crucial part in development and progression of esophageal squamous cell carcinoma (ESCC). Therefore, we examined associations between ESCC susceptibility and four haplotype-tagging single nucleotide polymorphisms (htSNPs) using a two stage case-control strategy. Odds ratios (OR) and 95% confidence intervals (95% CI) were computed by logistic regression model. After analyzing 1588 ESCC patients and frequency-matched 1600 unaffected controls, we found that MMP13 rs2252070 G > A genetic polymorphism is significantly associated with ESCC risk in Chinese Han populations (GA: OR = 0.63, 95% CI = 0.54–0.74, P = 1.7 × 10(−6), AA: OR = 0.73, 95% CI = 0.66–0.81, P = 1.8 × 10(−6)). Interestingly, the rs2252070 G-to-A change was shown to diminish a Sp1-binding site in ESCC cells. Reporter gene assays indicated that the rs2252070 A allele locating in a potential MMP13 promoter has low promoter activities. After measuring MMP13 gene expression in sixty-six pairs of esophageal cancer and normal tissues, we observed that the rs2252070 A protective allele carriers showed decreased oncogene MMP13 expression. Results of these analyses underline the support of the notion that MMP13 might function as a key oncogene in esophageal carcinogenesis. Nature Publishing Group 2016-06-01 /pmc/articles/PMC4887914/ /pubmed/27245877 http://dx.doi.org/10.1038/srep27013 Text en Copyright © 2016, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Shi, Meng Xia, Jianhong Xing, Huaixin Yang, Wenjun Xiong, Xiangyu Pan, Wenting Han, Sichong Shang, Jinhua Zhou, Changchun Zhou, Liqing Yang, Ming The Sp1-mediaded allelic regulation of MMP13 expression by an ESCC susceptibility SNP rs2252070 |
title | The Sp1-mediaded allelic regulation of MMP13 expression by an ESCC susceptibility SNP rs2252070 |
title_full | The Sp1-mediaded allelic regulation of MMP13 expression by an ESCC susceptibility SNP rs2252070 |
title_fullStr | The Sp1-mediaded allelic regulation of MMP13 expression by an ESCC susceptibility SNP rs2252070 |
title_full_unstemmed | The Sp1-mediaded allelic regulation of MMP13 expression by an ESCC susceptibility SNP rs2252070 |
title_short | The Sp1-mediaded allelic regulation of MMP13 expression by an ESCC susceptibility SNP rs2252070 |
title_sort | sp1-mediaded allelic regulation of mmp13 expression by an escc susceptibility snp rs2252070 |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4887914/ https://www.ncbi.nlm.nih.gov/pubmed/27245877 http://dx.doi.org/10.1038/srep27013 |
work_keys_str_mv | AT shimeng thesp1mediadedallelicregulationofmmp13expressionbyanesccsusceptibilitysnprs2252070 AT xiajianhong thesp1mediadedallelicregulationofmmp13expressionbyanesccsusceptibilitysnprs2252070 AT xinghuaixin thesp1mediadedallelicregulationofmmp13expressionbyanesccsusceptibilitysnprs2252070 AT yangwenjun thesp1mediadedallelicregulationofmmp13expressionbyanesccsusceptibilitysnprs2252070 AT xiongxiangyu thesp1mediadedallelicregulationofmmp13expressionbyanesccsusceptibilitysnprs2252070 AT panwenting thesp1mediadedallelicregulationofmmp13expressionbyanesccsusceptibilitysnprs2252070 AT hansichong thesp1mediadedallelicregulationofmmp13expressionbyanesccsusceptibilitysnprs2252070 AT shangjinhua thesp1mediadedallelicregulationofmmp13expressionbyanesccsusceptibilitysnprs2252070 AT zhouchangchun thesp1mediadedallelicregulationofmmp13expressionbyanesccsusceptibilitysnprs2252070 AT zhouliqing thesp1mediadedallelicregulationofmmp13expressionbyanesccsusceptibilitysnprs2252070 AT yangming thesp1mediadedallelicregulationofmmp13expressionbyanesccsusceptibilitysnprs2252070 AT shimeng sp1mediadedallelicregulationofmmp13expressionbyanesccsusceptibilitysnprs2252070 AT xiajianhong sp1mediadedallelicregulationofmmp13expressionbyanesccsusceptibilitysnprs2252070 AT xinghuaixin sp1mediadedallelicregulationofmmp13expressionbyanesccsusceptibilitysnprs2252070 AT yangwenjun sp1mediadedallelicregulationofmmp13expressionbyanesccsusceptibilitysnprs2252070 AT xiongxiangyu sp1mediadedallelicregulationofmmp13expressionbyanesccsusceptibilitysnprs2252070 AT panwenting sp1mediadedallelicregulationofmmp13expressionbyanesccsusceptibilitysnprs2252070 AT hansichong sp1mediadedallelicregulationofmmp13expressionbyanesccsusceptibilitysnprs2252070 AT shangjinhua sp1mediadedallelicregulationofmmp13expressionbyanesccsusceptibilitysnprs2252070 AT zhouchangchun sp1mediadedallelicregulationofmmp13expressionbyanesccsusceptibilitysnprs2252070 AT zhouliqing sp1mediadedallelicregulationofmmp13expressionbyanesccsusceptibilitysnprs2252070 AT yangming sp1mediadedallelicregulationofmmp13expressionbyanesccsusceptibilitysnprs2252070 |