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Optimized cultivation of Campylobacter concisus from gut mucosal biopsies in inflammatory bowel disease

BACKGROUND: Campylobacter concisus is a commensal of the human oral flora that has been linked to prolonged diarrhea and inflammatory bowel disease (IBD). It has been detected more often from intestinal biopsies in patients with IBD compared to healthy controls using PCR-based techniques, whereas th...

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Autores principales: Kirk, Karina Frahm, Nielsen, Hans Linde, Thorlacius-Ussing, Ole, Nielsen, Henrik
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4888738/
https://www.ncbi.nlm.nih.gov/pubmed/27252786
http://dx.doi.org/10.1186/s13099-016-0111-7
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author Kirk, Karina Frahm
Nielsen, Hans Linde
Thorlacius-Ussing, Ole
Nielsen, Henrik
author_facet Kirk, Karina Frahm
Nielsen, Hans Linde
Thorlacius-Ussing, Ole
Nielsen, Henrik
author_sort Kirk, Karina Frahm
collection PubMed
description BACKGROUND: Campylobacter concisus is a commensal of the human oral flora that has been linked to prolonged diarrhea and inflammatory bowel disease (IBD). It has been detected more often from intestinal biopsies in patients with IBD compared to healthy controls using PCR-based techniques, whereas the number of C. concisus culture-positive biopsies in previous studies has been very limited. Determining the rate of viable isolates present in the gut mucosa is of great importance when evaluating the role in different disease presentations. We therefore investigated a novel two-step cultivation procedure combining anaerobic and microaerobic incubation from several gut mucosal sites to improve isolate yield, and compared this to PCR results, from IBD patients and healthy controls. RESULTS: Cultivation with the novel two-step procedure yielded a higher rate of C. concisus isolates from mucosal biopsies than previously reported by other methods. From 52 IBD patients, 52/245 (21 %) biopsies were culture positive for C. concisus, while 121/245 (49 %) of biopsies were PCR positive. For 26 healthy controls, the numbers were 23/182 (13 %) and 66/182 (36 %), respectively (p < 0.001). The rate of cultivation and PCR detection was higher for IBD patients compared to healthy controls (p = 0.021, p = 0.008, respectively). CONCLUSIONS: Patients with IBD had a higher prevalence of C. concisus than healthy controls, by both cultivation and PCR detection. We found a higher rate of C. concisus isolates from gut mucosal biopsies in both IBD patients and healthy controls than in preceding studies, indicating that colonization of C. concisus in the gastrointestinal tract is more extensive than previously assumed.
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spelling pubmed-48887382016-06-02 Optimized cultivation of Campylobacter concisus from gut mucosal biopsies in inflammatory bowel disease Kirk, Karina Frahm Nielsen, Hans Linde Thorlacius-Ussing, Ole Nielsen, Henrik Gut Pathog Research BACKGROUND: Campylobacter concisus is a commensal of the human oral flora that has been linked to prolonged diarrhea and inflammatory bowel disease (IBD). It has been detected more often from intestinal biopsies in patients with IBD compared to healthy controls using PCR-based techniques, whereas the number of C. concisus culture-positive biopsies in previous studies has been very limited. Determining the rate of viable isolates present in the gut mucosa is of great importance when evaluating the role in different disease presentations. We therefore investigated a novel two-step cultivation procedure combining anaerobic and microaerobic incubation from several gut mucosal sites to improve isolate yield, and compared this to PCR results, from IBD patients and healthy controls. RESULTS: Cultivation with the novel two-step procedure yielded a higher rate of C. concisus isolates from mucosal biopsies than previously reported by other methods. From 52 IBD patients, 52/245 (21 %) biopsies were culture positive for C. concisus, while 121/245 (49 %) of biopsies were PCR positive. For 26 healthy controls, the numbers were 23/182 (13 %) and 66/182 (36 %), respectively (p < 0.001). The rate of cultivation and PCR detection was higher for IBD patients compared to healthy controls (p = 0.021, p = 0.008, respectively). CONCLUSIONS: Patients with IBD had a higher prevalence of C. concisus than healthy controls, by both cultivation and PCR detection. We found a higher rate of C. concisus isolates from gut mucosal biopsies in both IBD patients and healthy controls than in preceding studies, indicating that colonization of C. concisus in the gastrointestinal tract is more extensive than previously assumed. BioMed Central 2016-06-01 /pmc/articles/PMC4888738/ /pubmed/27252786 http://dx.doi.org/10.1186/s13099-016-0111-7 Text en © The Author(s) 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Kirk, Karina Frahm
Nielsen, Hans Linde
Thorlacius-Ussing, Ole
Nielsen, Henrik
Optimized cultivation of Campylobacter concisus from gut mucosal biopsies in inflammatory bowel disease
title Optimized cultivation of Campylobacter concisus from gut mucosal biopsies in inflammatory bowel disease
title_full Optimized cultivation of Campylobacter concisus from gut mucosal biopsies in inflammatory bowel disease
title_fullStr Optimized cultivation of Campylobacter concisus from gut mucosal biopsies in inflammatory bowel disease
title_full_unstemmed Optimized cultivation of Campylobacter concisus from gut mucosal biopsies in inflammatory bowel disease
title_short Optimized cultivation of Campylobacter concisus from gut mucosal biopsies in inflammatory bowel disease
title_sort optimized cultivation of campylobacter concisus from gut mucosal biopsies in inflammatory bowel disease
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4888738/
https://www.ncbi.nlm.nih.gov/pubmed/27252786
http://dx.doi.org/10.1186/s13099-016-0111-7
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