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Integration of new alternative reference strain genome sequences into the Saccharomyces genome database
The Saccharomyces Genome Database (SGD; http://www.yeastgenome.org/) is the authoritative community resource for the Saccharomyces cerevisiae reference genome sequence and its annotation. To provide a wider scope of genetic and phenotypic variation in yeast, the genome sequences and their correspond...
Autores principales: | , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4888754/ https://www.ncbi.nlm.nih.gov/pubmed/27252399 http://dx.doi.org/10.1093/database/baw074 |
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author | Song, Giltae Balakrishnan, Rama Binkley, Gail Costanzo, Maria C. Dalusag, Kyla Demeter, Janos Engel, Stacia Hellerstedt, Sage T. Karra, Kalpana Hitz, Benjamin C. Nash, Robert S. Paskov, Kelley Sheppard, Travis Skrzypek, Marek Weng, Shuai Wong, Edith Michael Cherry, J. |
author_facet | Song, Giltae Balakrishnan, Rama Binkley, Gail Costanzo, Maria C. Dalusag, Kyla Demeter, Janos Engel, Stacia Hellerstedt, Sage T. Karra, Kalpana Hitz, Benjamin C. Nash, Robert S. Paskov, Kelley Sheppard, Travis Skrzypek, Marek Weng, Shuai Wong, Edith Michael Cherry, J. |
author_sort | Song, Giltae |
collection | PubMed |
description | The Saccharomyces Genome Database (SGD; http://www.yeastgenome.org/) is the authoritative community resource for the Saccharomyces cerevisiae reference genome sequence and its annotation. To provide a wider scope of genetic and phenotypic variation in yeast, the genome sequences and their corresponding annotations from 11 alternative S. cerevisiae reference strains have been integrated into SGD. Genomic and protein sequence information for genes from these strains are now available on the Sequence and Protein tab of the corresponding Locus Summary pages. We illustrate how these genome sequences can be utilized to aid our understanding of strain-specific functional and phenotypic differences. Database URL: www.yeastgenome.org |
format | Online Article Text |
id | pubmed-4888754 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-48887542016-06-03 Integration of new alternative reference strain genome sequences into the Saccharomyces genome database Song, Giltae Balakrishnan, Rama Binkley, Gail Costanzo, Maria C. Dalusag, Kyla Demeter, Janos Engel, Stacia Hellerstedt, Sage T. Karra, Kalpana Hitz, Benjamin C. Nash, Robert S. Paskov, Kelley Sheppard, Travis Skrzypek, Marek Weng, Shuai Wong, Edith Michael Cherry, J. Database (Oxford) Database Update The Saccharomyces Genome Database (SGD; http://www.yeastgenome.org/) is the authoritative community resource for the Saccharomyces cerevisiae reference genome sequence and its annotation. To provide a wider scope of genetic and phenotypic variation in yeast, the genome sequences and their corresponding annotations from 11 alternative S. cerevisiae reference strains have been integrated into SGD. Genomic and protein sequence information for genes from these strains are now available on the Sequence and Protein tab of the corresponding Locus Summary pages. We illustrate how these genome sequences can be utilized to aid our understanding of strain-specific functional and phenotypic differences. Database URL: www.yeastgenome.org Oxford University Press 2016-05-31 /pmc/articles/PMC4888754/ /pubmed/27252399 http://dx.doi.org/10.1093/database/baw074 Text en © The Author(s) 2016. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Database Update Song, Giltae Balakrishnan, Rama Binkley, Gail Costanzo, Maria C. Dalusag, Kyla Demeter, Janos Engel, Stacia Hellerstedt, Sage T. Karra, Kalpana Hitz, Benjamin C. Nash, Robert S. Paskov, Kelley Sheppard, Travis Skrzypek, Marek Weng, Shuai Wong, Edith Michael Cherry, J. Integration of new alternative reference strain genome sequences into the Saccharomyces genome database |
title | Integration of new alternative reference strain genome sequences into the Saccharomyces genome database |
title_full | Integration of new alternative reference strain genome sequences into the Saccharomyces genome database |
title_fullStr | Integration of new alternative reference strain genome sequences into the Saccharomyces genome database |
title_full_unstemmed | Integration of new alternative reference strain genome sequences into the Saccharomyces genome database |
title_short | Integration of new alternative reference strain genome sequences into the Saccharomyces genome database |
title_sort | integration of new alternative reference strain genome sequences into the saccharomyces genome database |
topic | Database Update |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4888754/ https://www.ncbi.nlm.nih.gov/pubmed/27252399 http://dx.doi.org/10.1093/database/baw074 |
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