Cargando…
Contig-Layout-Authenticator (CLA): A Combinatorial Approach to Ordering and Scaffolding of Bacterial Contigs for Comparative Genomics and Molecular Epidemiology
A wide variety of genome sequencing platforms have emerged in the recent past. High-throughput platforms like Illumina and 454 are essentially adaptations of the shotgun approach generating millions of fragmented single or paired sequencing reads. To reconstruct whole genomes, the reads have to be a...
Autores principales: | Shaik, Sabiha, Kumar, Narender, Lankapalli, Aditya K., Tiwari, Sumeet K., Baddam, Ramani, Ahmed, Niyaz |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4889084/ https://www.ncbi.nlm.nih.gov/pubmed/27248146 http://dx.doi.org/10.1371/journal.pone.0155459 |
Ejemplares similares
-
Genome dynamics and evolution of Salmonella Typhi strains from the typhoid-endemic zones
por: Baddam, Ramani, et al.
Publicado: (2014) -
Scaffold filling, contig fusion and comparative gene order inference
por: Muñoz, Adriana, et al.
Publicado: (2010) -
EndHiC: assemble large contigs into chromosome-level scaffolds using the Hi-C links from contig ends
por: Wang, Sen, et al.
Publicado: (2022) -
Anchoring and ordering NGS contig assemblies by population sequencing (POPSEQ)
por: Mascher, Martin, et al.
Publicado: (2013) -
Multi-CAR: a tool of contig scaffolding using multiple references
por: Chen, Kun-Tze, et al.
Publicado: (2016)