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cSPider – Evaluation of a Free and Open-Source Automated Tool to Analyze Corticomotor Silent Period

BACKGROUND: The corticomotor silent period (CSP), as assessed noninvasively by transcranial magnetic stimulation (TMS) in the primary motor cortex, has been found to reflect intracortical inhibitory mechanisms. Analysis of CSP is mostly conducted manually. However, this approach is time-consuming, a...

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Autores principales: Wilke, Skadi, Groenveld, Dennis, Grittner, Ulrike, List, Jonathan, Flöel, Agnes
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4889140/
https://www.ncbi.nlm.nih.gov/pubmed/27249017
http://dx.doi.org/10.1371/journal.pone.0156066
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author Wilke, Skadi
Groenveld, Dennis
Grittner, Ulrike
List, Jonathan
Flöel, Agnes
author_facet Wilke, Skadi
Groenveld, Dennis
Grittner, Ulrike
List, Jonathan
Flöel, Agnes
author_sort Wilke, Skadi
collection PubMed
description BACKGROUND: The corticomotor silent period (CSP), as assessed noninvasively by transcranial magnetic stimulation (TMS) in the primary motor cortex, has been found to reflect intracortical inhibitory mechanisms. Analysis of CSP is mostly conducted manually. However, this approach is time-consuming, and comparison of results from different laboratories may be compromised by inter-rater variability in analysis. No open source program for automated analysis is currently available. METHODS/RESULTS: Here, we describe cross-validation with the manual analysis of an in-house written automated tool to assess CSP (cSPider). Results from automated routine were compared with results of the manual evaluation. We found high inter-method reliability between automated and manual analysis (p<0.001), and significantly reduced time for CSP analysis (median = 10.3 sec for automated analysis of 10 CSPs vs. median = 270 sec for manual analysis of 10 CSPs). cSPider can be downloaded free of charge. CONCLUSION: cSPider allows automated analysis of CSP in a reliable and time-efficient manner. Use of this open-source tool may help to improve comparison of data from different laboratories.
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spelling pubmed-48891402016-06-10 cSPider – Evaluation of a Free and Open-Source Automated Tool to Analyze Corticomotor Silent Period Wilke, Skadi Groenveld, Dennis Grittner, Ulrike List, Jonathan Flöel, Agnes PLoS One Research Article BACKGROUND: The corticomotor silent period (CSP), as assessed noninvasively by transcranial magnetic stimulation (TMS) in the primary motor cortex, has been found to reflect intracortical inhibitory mechanisms. Analysis of CSP is mostly conducted manually. However, this approach is time-consuming, and comparison of results from different laboratories may be compromised by inter-rater variability in analysis. No open source program for automated analysis is currently available. METHODS/RESULTS: Here, we describe cross-validation with the manual analysis of an in-house written automated tool to assess CSP (cSPider). Results from automated routine were compared with results of the manual evaluation. We found high inter-method reliability between automated and manual analysis (p<0.001), and significantly reduced time for CSP analysis (median = 10.3 sec for automated analysis of 10 CSPs vs. median = 270 sec for manual analysis of 10 CSPs). cSPider can be downloaded free of charge. CONCLUSION: cSPider allows automated analysis of CSP in a reliable and time-efficient manner. Use of this open-source tool may help to improve comparison of data from different laboratories. Public Library of Science 2016-06-01 /pmc/articles/PMC4889140/ /pubmed/27249017 http://dx.doi.org/10.1371/journal.pone.0156066 Text en © 2016 Wilke et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Wilke, Skadi
Groenveld, Dennis
Grittner, Ulrike
List, Jonathan
Flöel, Agnes
cSPider – Evaluation of a Free and Open-Source Automated Tool to Analyze Corticomotor Silent Period
title cSPider – Evaluation of a Free and Open-Source Automated Tool to Analyze Corticomotor Silent Period
title_full cSPider – Evaluation of a Free and Open-Source Automated Tool to Analyze Corticomotor Silent Period
title_fullStr cSPider – Evaluation of a Free and Open-Source Automated Tool to Analyze Corticomotor Silent Period
title_full_unstemmed cSPider – Evaluation of a Free and Open-Source Automated Tool to Analyze Corticomotor Silent Period
title_short cSPider – Evaluation of a Free and Open-Source Automated Tool to Analyze Corticomotor Silent Period
title_sort cspider – evaluation of a free and open-source automated tool to analyze corticomotor silent period
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4889140/
https://www.ncbi.nlm.nih.gov/pubmed/27249017
http://dx.doi.org/10.1371/journal.pone.0156066
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