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cSPider – Evaluation of a Free and Open-Source Automated Tool to Analyze Corticomotor Silent Period
BACKGROUND: The corticomotor silent period (CSP), as assessed noninvasively by transcranial magnetic stimulation (TMS) in the primary motor cortex, has been found to reflect intracortical inhibitory mechanisms. Analysis of CSP is mostly conducted manually. However, this approach is time-consuming, a...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4889140/ https://www.ncbi.nlm.nih.gov/pubmed/27249017 http://dx.doi.org/10.1371/journal.pone.0156066 |
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author | Wilke, Skadi Groenveld, Dennis Grittner, Ulrike List, Jonathan Flöel, Agnes |
author_facet | Wilke, Skadi Groenveld, Dennis Grittner, Ulrike List, Jonathan Flöel, Agnes |
author_sort | Wilke, Skadi |
collection | PubMed |
description | BACKGROUND: The corticomotor silent period (CSP), as assessed noninvasively by transcranial magnetic stimulation (TMS) in the primary motor cortex, has been found to reflect intracortical inhibitory mechanisms. Analysis of CSP is mostly conducted manually. However, this approach is time-consuming, and comparison of results from different laboratories may be compromised by inter-rater variability in analysis. No open source program for automated analysis is currently available. METHODS/RESULTS: Here, we describe cross-validation with the manual analysis of an in-house written automated tool to assess CSP (cSPider). Results from automated routine were compared with results of the manual evaluation. We found high inter-method reliability between automated and manual analysis (p<0.001), and significantly reduced time for CSP analysis (median = 10.3 sec for automated analysis of 10 CSPs vs. median = 270 sec for manual analysis of 10 CSPs). cSPider can be downloaded free of charge. CONCLUSION: cSPider allows automated analysis of CSP in a reliable and time-efficient manner. Use of this open-source tool may help to improve comparison of data from different laboratories. |
format | Online Article Text |
id | pubmed-4889140 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-48891402016-06-10 cSPider – Evaluation of a Free and Open-Source Automated Tool to Analyze Corticomotor Silent Period Wilke, Skadi Groenveld, Dennis Grittner, Ulrike List, Jonathan Flöel, Agnes PLoS One Research Article BACKGROUND: The corticomotor silent period (CSP), as assessed noninvasively by transcranial magnetic stimulation (TMS) in the primary motor cortex, has been found to reflect intracortical inhibitory mechanisms. Analysis of CSP is mostly conducted manually. However, this approach is time-consuming, and comparison of results from different laboratories may be compromised by inter-rater variability in analysis. No open source program for automated analysis is currently available. METHODS/RESULTS: Here, we describe cross-validation with the manual analysis of an in-house written automated tool to assess CSP (cSPider). Results from automated routine were compared with results of the manual evaluation. We found high inter-method reliability between automated and manual analysis (p<0.001), and significantly reduced time for CSP analysis (median = 10.3 sec for automated analysis of 10 CSPs vs. median = 270 sec for manual analysis of 10 CSPs). cSPider can be downloaded free of charge. CONCLUSION: cSPider allows automated analysis of CSP in a reliable and time-efficient manner. Use of this open-source tool may help to improve comparison of data from different laboratories. Public Library of Science 2016-06-01 /pmc/articles/PMC4889140/ /pubmed/27249017 http://dx.doi.org/10.1371/journal.pone.0156066 Text en © 2016 Wilke et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Wilke, Skadi Groenveld, Dennis Grittner, Ulrike List, Jonathan Flöel, Agnes cSPider – Evaluation of a Free and Open-Source Automated Tool to Analyze Corticomotor Silent Period |
title | cSPider – Evaluation of a Free and Open-Source Automated Tool to Analyze Corticomotor Silent Period |
title_full | cSPider – Evaluation of a Free and Open-Source Automated Tool to Analyze Corticomotor Silent Period |
title_fullStr | cSPider – Evaluation of a Free and Open-Source Automated Tool to Analyze Corticomotor Silent Period |
title_full_unstemmed | cSPider – Evaluation of a Free and Open-Source Automated Tool to Analyze Corticomotor Silent Period |
title_short | cSPider – Evaluation of a Free and Open-Source Automated Tool to Analyze Corticomotor Silent Period |
title_sort | cspider – evaluation of a free and open-source automated tool to analyze corticomotor silent period |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4889140/ https://www.ncbi.nlm.nih.gov/pubmed/27249017 http://dx.doi.org/10.1371/journal.pone.0156066 |
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