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Differential Impacts of Willow and Mineral Fertilizer on Bacterial Communities and Biodegradation in Diesel Fuel Oil-Contaminated Soil

Despite decades of research there is limited understanding of how vegetation impacts the ability of microbial communities to process organic contaminants in soil. Using a combination of traditional and molecular assays, we examined how phytoremediation with willow and/or fertilization affected the m...

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Autores principales: Leewis, Mary-Cathrine, Uhlik, Ondrej, Fraraccio, Serena, McFarlin, Kelly, Kottara, Anastasia, Glover, Catherine, Macek, Tomas, Leigh, Mary Beth
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4889597/
https://www.ncbi.nlm.nih.gov/pubmed/27313574
http://dx.doi.org/10.3389/fmicb.2016.00837
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author Leewis, Mary-Cathrine
Uhlik, Ondrej
Fraraccio, Serena
McFarlin, Kelly
Kottara, Anastasia
Glover, Catherine
Macek, Tomas
Leigh, Mary Beth
author_facet Leewis, Mary-Cathrine
Uhlik, Ondrej
Fraraccio, Serena
McFarlin, Kelly
Kottara, Anastasia
Glover, Catherine
Macek, Tomas
Leigh, Mary Beth
author_sort Leewis, Mary-Cathrine
collection PubMed
description Despite decades of research there is limited understanding of how vegetation impacts the ability of microbial communities to process organic contaminants in soil. Using a combination of traditional and molecular assays, we examined how phytoremediation with willow and/or fertilization affected the microbial community present and active in the transformation of diesel contaminants. In a pot study, willow had a significant role in structuring the total bacterial community and resulted in significant decreases in diesel range organics (DRO). However, stable isotope probing (SIP) indicated that fertilizer drove the differences seen in community structure and function. Finally, analysis of the total variance in both pot and SIP experiments indicated an interactive effect between willow and fertilizer on the bacterial communities. This study clearly demonstrates that a willow native to Alaska accelerates DRO degradation, and together with fertilizer, increases aromatic degradation by shifting microbial community structure and the identity of active naphthalene degraders.
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spelling pubmed-48895972016-06-16 Differential Impacts of Willow and Mineral Fertilizer on Bacterial Communities and Biodegradation in Diesel Fuel Oil-Contaminated Soil Leewis, Mary-Cathrine Uhlik, Ondrej Fraraccio, Serena McFarlin, Kelly Kottara, Anastasia Glover, Catherine Macek, Tomas Leigh, Mary Beth Front Microbiol Microbiology Despite decades of research there is limited understanding of how vegetation impacts the ability of microbial communities to process organic contaminants in soil. Using a combination of traditional and molecular assays, we examined how phytoremediation with willow and/or fertilization affected the microbial community present and active in the transformation of diesel contaminants. In a pot study, willow had a significant role in structuring the total bacterial community and resulted in significant decreases in diesel range organics (DRO). However, stable isotope probing (SIP) indicated that fertilizer drove the differences seen in community structure and function. Finally, analysis of the total variance in both pot and SIP experiments indicated an interactive effect between willow and fertilizer on the bacterial communities. This study clearly demonstrates that a willow native to Alaska accelerates DRO degradation, and together with fertilizer, increases aromatic degradation by shifting microbial community structure and the identity of active naphthalene degraders. Frontiers Media S.A. 2016-06-02 /pmc/articles/PMC4889597/ /pubmed/27313574 http://dx.doi.org/10.3389/fmicb.2016.00837 Text en Copyright © 2016 Leewis, Uhlik, Fraraccio, McFarlin, Kottara, Glover, Macek and Leigh. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Leewis, Mary-Cathrine
Uhlik, Ondrej
Fraraccio, Serena
McFarlin, Kelly
Kottara, Anastasia
Glover, Catherine
Macek, Tomas
Leigh, Mary Beth
Differential Impacts of Willow and Mineral Fertilizer on Bacterial Communities and Biodegradation in Diesel Fuel Oil-Contaminated Soil
title Differential Impacts of Willow and Mineral Fertilizer on Bacterial Communities and Biodegradation in Diesel Fuel Oil-Contaminated Soil
title_full Differential Impacts of Willow and Mineral Fertilizer on Bacterial Communities and Biodegradation in Diesel Fuel Oil-Contaminated Soil
title_fullStr Differential Impacts of Willow and Mineral Fertilizer on Bacterial Communities and Biodegradation in Diesel Fuel Oil-Contaminated Soil
title_full_unstemmed Differential Impacts of Willow and Mineral Fertilizer on Bacterial Communities and Biodegradation in Diesel Fuel Oil-Contaminated Soil
title_short Differential Impacts of Willow and Mineral Fertilizer on Bacterial Communities and Biodegradation in Diesel Fuel Oil-Contaminated Soil
title_sort differential impacts of willow and mineral fertilizer on bacterial communities and biodegradation in diesel fuel oil-contaminated soil
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4889597/
https://www.ncbi.nlm.nih.gov/pubmed/27313574
http://dx.doi.org/10.3389/fmicb.2016.00837
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