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Differential Impacts of Willow and Mineral Fertilizer on Bacterial Communities and Biodegradation in Diesel Fuel Oil-Contaminated Soil
Despite decades of research there is limited understanding of how vegetation impacts the ability of microbial communities to process organic contaminants in soil. Using a combination of traditional and molecular assays, we examined how phytoremediation with willow and/or fertilization affected the m...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4889597/ https://www.ncbi.nlm.nih.gov/pubmed/27313574 http://dx.doi.org/10.3389/fmicb.2016.00837 |
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author | Leewis, Mary-Cathrine Uhlik, Ondrej Fraraccio, Serena McFarlin, Kelly Kottara, Anastasia Glover, Catherine Macek, Tomas Leigh, Mary Beth |
author_facet | Leewis, Mary-Cathrine Uhlik, Ondrej Fraraccio, Serena McFarlin, Kelly Kottara, Anastasia Glover, Catherine Macek, Tomas Leigh, Mary Beth |
author_sort | Leewis, Mary-Cathrine |
collection | PubMed |
description | Despite decades of research there is limited understanding of how vegetation impacts the ability of microbial communities to process organic contaminants in soil. Using a combination of traditional and molecular assays, we examined how phytoremediation with willow and/or fertilization affected the microbial community present and active in the transformation of diesel contaminants. In a pot study, willow had a significant role in structuring the total bacterial community and resulted in significant decreases in diesel range organics (DRO). However, stable isotope probing (SIP) indicated that fertilizer drove the differences seen in community structure and function. Finally, analysis of the total variance in both pot and SIP experiments indicated an interactive effect between willow and fertilizer on the bacterial communities. This study clearly demonstrates that a willow native to Alaska accelerates DRO degradation, and together with fertilizer, increases aromatic degradation by shifting microbial community structure and the identity of active naphthalene degraders. |
format | Online Article Text |
id | pubmed-4889597 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-48895972016-06-16 Differential Impacts of Willow and Mineral Fertilizer on Bacterial Communities and Biodegradation in Diesel Fuel Oil-Contaminated Soil Leewis, Mary-Cathrine Uhlik, Ondrej Fraraccio, Serena McFarlin, Kelly Kottara, Anastasia Glover, Catherine Macek, Tomas Leigh, Mary Beth Front Microbiol Microbiology Despite decades of research there is limited understanding of how vegetation impacts the ability of microbial communities to process organic contaminants in soil. Using a combination of traditional and molecular assays, we examined how phytoremediation with willow and/or fertilization affected the microbial community present and active in the transformation of diesel contaminants. In a pot study, willow had a significant role in structuring the total bacterial community and resulted in significant decreases in diesel range organics (DRO). However, stable isotope probing (SIP) indicated that fertilizer drove the differences seen in community structure and function. Finally, analysis of the total variance in both pot and SIP experiments indicated an interactive effect between willow and fertilizer on the bacterial communities. This study clearly demonstrates that a willow native to Alaska accelerates DRO degradation, and together with fertilizer, increases aromatic degradation by shifting microbial community structure and the identity of active naphthalene degraders. Frontiers Media S.A. 2016-06-02 /pmc/articles/PMC4889597/ /pubmed/27313574 http://dx.doi.org/10.3389/fmicb.2016.00837 Text en Copyright © 2016 Leewis, Uhlik, Fraraccio, McFarlin, Kottara, Glover, Macek and Leigh. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Microbiology Leewis, Mary-Cathrine Uhlik, Ondrej Fraraccio, Serena McFarlin, Kelly Kottara, Anastasia Glover, Catherine Macek, Tomas Leigh, Mary Beth Differential Impacts of Willow and Mineral Fertilizer on Bacterial Communities and Biodegradation in Diesel Fuel Oil-Contaminated Soil |
title | Differential Impacts of Willow and Mineral Fertilizer on Bacterial Communities and Biodegradation in Diesel Fuel Oil-Contaminated Soil |
title_full | Differential Impacts of Willow and Mineral Fertilizer on Bacterial Communities and Biodegradation in Diesel Fuel Oil-Contaminated Soil |
title_fullStr | Differential Impacts of Willow and Mineral Fertilizer on Bacterial Communities and Biodegradation in Diesel Fuel Oil-Contaminated Soil |
title_full_unstemmed | Differential Impacts of Willow and Mineral Fertilizer on Bacterial Communities and Biodegradation in Diesel Fuel Oil-Contaminated Soil |
title_short | Differential Impacts of Willow and Mineral Fertilizer on Bacterial Communities and Biodegradation in Diesel Fuel Oil-Contaminated Soil |
title_sort | differential impacts of willow and mineral fertilizer on bacterial communities and biodegradation in diesel fuel oil-contaminated soil |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4889597/ https://www.ncbi.nlm.nih.gov/pubmed/27313574 http://dx.doi.org/10.3389/fmicb.2016.00837 |
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