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High-speed DNA-based rolling motors powered by RNase H

DNA-based machines that walk by converting chemical energy into controlled motion could be of use in applications such as next generation sensors, drug delivery platforms, and biological computing. Despite their exquisite programmability, DNA-based walkers are, however, challenging to work with due...

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Detalles Bibliográficos
Autores principales: Yehl, Kevin, Mugler, Andrew, Vivek, Skanda, Liu, Yang, Zhang, Yun, Fan, Mengzhen, Weeks, Eric R., Salaita, Khalid
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4890967/
https://www.ncbi.nlm.nih.gov/pubmed/26619152
http://dx.doi.org/10.1038/nnano.2015.259
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author Yehl, Kevin
Mugler, Andrew
Vivek, Skanda
Liu, Yang
Zhang, Yun
Fan, Mengzhen
Weeks, Eric R.
Salaita, Khalid
author_facet Yehl, Kevin
Mugler, Andrew
Vivek, Skanda
Liu, Yang
Zhang, Yun
Fan, Mengzhen
Weeks, Eric R.
Salaita, Khalid
author_sort Yehl, Kevin
collection PubMed
description DNA-based machines that walk by converting chemical energy into controlled motion could be of use in applications such as next generation sensors, drug delivery platforms, and biological computing. Despite their exquisite programmability, DNA-based walkers are, however, challenging to work with due to their low fidelity and slow rates (~1 nm/min). Here, we report DNA-based machines that roll rather than walk, and consequently have a maximum speed and processivity that is three-orders of magnitude greater than conventional DNA motors. The motors are made from DNA-coated spherical particles that hybridise to a surface modified with complementary RNA; motion is achieved through the addition of RNase H, which selectively hydrolyses hybridised RNA. Spherical motors move in a self-avoiding manner, whereas anisotropic particles, such as dimerised particles or rod-shaped particles travel linearly without a track or external force. Finally, we demonstrate detection of single nucleotide polymorphism by measuring particle displacement using a smartphone camera.
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spelling pubmed-48909672016-07-08 High-speed DNA-based rolling motors powered by RNase H Yehl, Kevin Mugler, Andrew Vivek, Skanda Liu, Yang Zhang, Yun Fan, Mengzhen Weeks, Eric R. Salaita, Khalid Nat Nanotechnol Article DNA-based machines that walk by converting chemical energy into controlled motion could be of use in applications such as next generation sensors, drug delivery platforms, and biological computing. Despite their exquisite programmability, DNA-based walkers are, however, challenging to work with due to their low fidelity and slow rates (~1 nm/min). Here, we report DNA-based machines that roll rather than walk, and consequently have a maximum speed and processivity that is three-orders of magnitude greater than conventional DNA motors. The motors are made from DNA-coated spherical particles that hybridise to a surface modified with complementary RNA; motion is achieved through the addition of RNase H, which selectively hydrolyses hybridised RNA. Spherical motors move in a self-avoiding manner, whereas anisotropic particles, such as dimerised particles or rod-shaped particles travel linearly without a track or external force. Finally, we demonstrate detection of single nucleotide polymorphism by measuring particle displacement using a smartphone camera. 2015-11-30 2016-02 /pmc/articles/PMC4890967/ /pubmed/26619152 http://dx.doi.org/10.1038/nnano.2015.259 Text en http://www.nature.com/authors/editorial_policies/license.html#terms Users may view, print, copy, and download text and data-mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use:http://www.nature.com/authors/editorial_policies/license.html#terms
spellingShingle Article
Yehl, Kevin
Mugler, Andrew
Vivek, Skanda
Liu, Yang
Zhang, Yun
Fan, Mengzhen
Weeks, Eric R.
Salaita, Khalid
High-speed DNA-based rolling motors powered by RNase H
title High-speed DNA-based rolling motors powered by RNase H
title_full High-speed DNA-based rolling motors powered by RNase H
title_fullStr High-speed DNA-based rolling motors powered by RNase H
title_full_unstemmed High-speed DNA-based rolling motors powered by RNase H
title_short High-speed DNA-based rolling motors powered by RNase H
title_sort high-speed dna-based rolling motors powered by rnase h
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4890967/
https://www.ncbi.nlm.nih.gov/pubmed/26619152
http://dx.doi.org/10.1038/nnano.2015.259
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