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Meta-analysis of the differentially expressed microRNA profiles in nasopharyngeal carcinoma
MicroRNAs(miRNAs), as non-coding molecules, were proved to be correlated with gene expression in naspharyngeal carcinoma (NPC) development. In this research, a comprehensive meta-analysis of eight independent miRNA expression studies in NPC was preformed by using robust rank aggregation method (RRA)...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals LLC
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4891136/ https://www.ncbi.nlm.nih.gov/pubmed/26824418 http://dx.doi.org/10.18632/oncotarget.7013 |
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author | Luan, Junwen Wang, Junfu Su, Qinghong Chen, Xuemei Jiang, Guosheng Xu, Xiaoqun |
author_facet | Luan, Junwen Wang, Junfu Su, Qinghong Chen, Xuemei Jiang, Guosheng Xu, Xiaoqun |
author_sort | Luan, Junwen |
collection | PubMed |
description | MicroRNAs(miRNAs), as non-coding molecules, were proved to be correlated with gene expression in naspharyngeal carcinoma (NPC) development. In this research, a comprehensive meta-analysis of eight independent miRNA expression studies in NPC was preformed by using robust rank aggregation method (RRA), which contained a total of 775 tumor and 227 non-cancerous samples. There were 7 significant dysregulated miRNAs identified including three increased (miR-483–5p, miR-29c-3p and miR-205–5p) and four decreased (miR-29b-3p, let-7d-5p, miR-100– 5p and let-7g-5p) miRNAs. Subsequently, the miRNA target prediction and pathway enrichment analysis were carried out to find out the biological and functional relevant genes involved in the meta-signature miRNA regulation. Finally, several signaling and cancer pathogenesis pathways were suggested to be more frequently associated with the progression of NPC. In this research the meta-signature miRNA identified may be used to develop a series of diagnostic and prognostic biomarkers for NPC that serve specificity for use in clinics. |
format | Online Article Text |
id | pubmed-4891136 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Impact Journals LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-48911362016-06-23 Meta-analysis of the differentially expressed microRNA profiles in nasopharyngeal carcinoma Luan, Junwen Wang, Junfu Su, Qinghong Chen, Xuemei Jiang, Guosheng Xu, Xiaoqun Oncotarget Research Paper MicroRNAs(miRNAs), as non-coding molecules, were proved to be correlated with gene expression in naspharyngeal carcinoma (NPC) development. In this research, a comprehensive meta-analysis of eight independent miRNA expression studies in NPC was preformed by using robust rank aggregation method (RRA), which contained a total of 775 tumor and 227 non-cancerous samples. There were 7 significant dysregulated miRNAs identified including three increased (miR-483–5p, miR-29c-3p and miR-205–5p) and four decreased (miR-29b-3p, let-7d-5p, miR-100– 5p and let-7g-5p) miRNAs. Subsequently, the miRNA target prediction and pathway enrichment analysis were carried out to find out the biological and functional relevant genes involved in the meta-signature miRNA regulation. Finally, several signaling and cancer pathogenesis pathways were suggested to be more frequently associated with the progression of NPC. In this research the meta-signature miRNA identified may be used to develop a series of diagnostic and prognostic biomarkers for NPC that serve specificity for use in clinics. Impact Journals LLC 2016-01-25 /pmc/articles/PMC4891136/ /pubmed/26824418 http://dx.doi.org/10.18632/oncotarget.7013 Text en Copyright: © 2016 Luan et al. http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Luan, Junwen Wang, Junfu Su, Qinghong Chen, Xuemei Jiang, Guosheng Xu, Xiaoqun Meta-analysis of the differentially expressed microRNA profiles in nasopharyngeal carcinoma |
title | Meta-analysis of the differentially expressed microRNA profiles in nasopharyngeal carcinoma |
title_full | Meta-analysis of the differentially expressed microRNA profiles in nasopharyngeal carcinoma |
title_fullStr | Meta-analysis of the differentially expressed microRNA profiles in nasopharyngeal carcinoma |
title_full_unstemmed | Meta-analysis of the differentially expressed microRNA profiles in nasopharyngeal carcinoma |
title_short | Meta-analysis of the differentially expressed microRNA profiles in nasopharyngeal carcinoma |
title_sort | meta-analysis of the differentially expressed microrna profiles in nasopharyngeal carcinoma |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4891136/ https://www.ncbi.nlm.nih.gov/pubmed/26824418 http://dx.doi.org/10.18632/oncotarget.7013 |
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