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Metabolically active, non-nitrogen fixing, Trichodesmium in UK coastal waters during winter
Trichodesmium, a colonial cyanobacterium typically associated with tropical waters, was observed between January and April 2014 in the western English Channel. Sequencing of the heterocyst differentiation (hetR) and 16S rRNA genes placed this community within the Clade IV Trichodesmium, an understud...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4892227/ https://www.ncbi.nlm.nih.gov/pubmed/27274100 http://dx.doi.org/10.1093/plankt/fbv123 |
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author | Rees, Andrew P. Tait, Karen Widdicombe, Claire E. Quartly, Graham D. McEvoy, Andrea J. Al-Moosawi, Lisa |
author_facet | Rees, Andrew P. Tait, Karen Widdicombe, Claire E. Quartly, Graham D. McEvoy, Andrea J. Al-Moosawi, Lisa |
author_sort | Rees, Andrew P. |
collection | PubMed |
description | Trichodesmium, a colonial cyanobacterium typically associated with tropical waters, was observed between January and April 2014 in the western English Channel. Sequencing of the heterocyst differentiation (hetR) and 16S rRNA genes placed this community within the Clade IV Trichodesmium, an understudied clade previously found only in low numbers in warmer waters. Nitrogen fixation was not detected although measurable rates of nitrate uptake and carbon fixation were observed. Trichodesmium RuBisCO transcript abundance relative to gene abundance suggests the potential for viable and potentially active Trichodesmium carbon fixation. Observations of Trichodesmium when coupled with a numerical advection model indicate that Trichodesmium communities can remain viable for >3.5 months at temperatures lower than previously expected. The results suggest that Clade IV Trichodesmium occupies a different niche to other Trichodesmium species, and is a cold- or low-light-adapted variant. |
format | Online Article Text |
id | pubmed-4892227 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-48922272016-06-07 Metabolically active, non-nitrogen fixing, Trichodesmium in UK coastal waters during winter Rees, Andrew P. Tait, Karen Widdicombe, Claire E. Quartly, Graham D. McEvoy, Andrea J. Al-Moosawi, Lisa J Plankton Res Short Communication Trichodesmium, a colonial cyanobacterium typically associated with tropical waters, was observed between January and April 2014 in the western English Channel. Sequencing of the heterocyst differentiation (hetR) and 16S rRNA genes placed this community within the Clade IV Trichodesmium, an understudied clade previously found only in low numbers in warmer waters. Nitrogen fixation was not detected although measurable rates of nitrate uptake and carbon fixation were observed. Trichodesmium RuBisCO transcript abundance relative to gene abundance suggests the potential for viable and potentially active Trichodesmium carbon fixation. Observations of Trichodesmium when coupled with a numerical advection model indicate that Trichodesmium communities can remain viable for >3.5 months at temperatures lower than previously expected. The results suggest that Clade IV Trichodesmium occupies a different niche to other Trichodesmium species, and is a cold- or low-light-adapted variant. Oxford University Press 2016-05 2016-05-30 /pmc/articles/PMC4892227/ /pubmed/27274100 http://dx.doi.org/10.1093/plankt/fbv123 Text en © The Author 2016. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Communication Rees, Andrew P. Tait, Karen Widdicombe, Claire E. Quartly, Graham D. McEvoy, Andrea J. Al-Moosawi, Lisa Metabolically active, non-nitrogen fixing, Trichodesmium in UK coastal waters during winter |
title | Metabolically active, non-nitrogen fixing, Trichodesmium in UK coastal waters during winter |
title_full | Metabolically active, non-nitrogen fixing, Trichodesmium in UK coastal waters during winter |
title_fullStr | Metabolically active, non-nitrogen fixing, Trichodesmium in UK coastal waters during winter |
title_full_unstemmed | Metabolically active, non-nitrogen fixing, Trichodesmium in UK coastal waters during winter |
title_short | Metabolically active, non-nitrogen fixing, Trichodesmium in UK coastal waters during winter |
title_sort | metabolically active, non-nitrogen fixing, trichodesmium in uk coastal waters during winter |
topic | Short Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4892227/ https://www.ncbi.nlm.nih.gov/pubmed/27274100 http://dx.doi.org/10.1093/plankt/fbv123 |
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