MDSINE: Microbial Dynamical Systems INference Engine for microbiome time-series analyses

Predicting dynamics of host-microbial ecosystems is crucial for the rational design of bacteriotherapies. We present MDSINE, a suite of algorithms for inferring dynamical systems models from microbiome time-series data and predicting temporal behaviors. Using simulated data, we demonstrate that MDSI...

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Detalles Bibliográficos
Autores principales: Bucci, Vanni, Tzen, Belinda, Li, Ning, Simmons, Matt, Tanoue, Takeshi, Bogart, Elijah, Deng, Luxue, Yeliseyev, Vladimir, Delaney, Mary L., Liu, Qing, Olle, Bernat, Stein, Richard R., Honda, Kenya, Bry, Lynn, Gerber, Georg K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Method
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4893271/
https://www.ncbi.nlm.nih.gov/pubmed/27259475
http://dx.doi.org/10.1186/s13059-016-0980-6

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