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A novel method for classifying cortical state to identify the accompanying changes in cerebral hemodynamics
BACKGROUND: Many brain imaging techniques interpret the haemodynamic response as an indirect indicator of underlying neural activity. However, a challenge when interpreting this blood based signal is how changes in brain state may affect both baseline and stimulus evoked haemodynamics. NEW METHOD: W...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier/North-Holland Biomedical Press
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4896992/ https://www.ncbi.nlm.nih.gov/pubmed/27063501 http://dx.doi.org/10.1016/j.jneumeth.2016.04.005 |
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author | Slack, R. Boorman, L. Patel, P. Harris, S. Bruyns-Haylett, M. Kennerley, A. Jones, M. Berwick, J. |
author_facet | Slack, R. Boorman, L. Patel, P. Harris, S. Bruyns-Haylett, M. Kennerley, A. Jones, M. Berwick, J. |
author_sort | Slack, R. |
collection | PubMed |
description | BACKGROUND: Many brain imaging techniques interpret the haemodynamic response as an indirect indicator of underlying neural activity. However, a challenge when interpreting this blood based signal is how changes in brain state may affect both baseline and stimulus evoked haemodynamics. NEW METHOD: We developed an Automatic Brain State Classifier (ABSC), validated on data from anaesthetised rodents. It uses vectorised information obtained from the windowed spectral frequency power of the Local Field Potential. Current state is then classified by comparing this vectorised information against that calculated from state specific training datasets. RESULTS: The ABSC identified two user defined brain states (synchronised and desynchronised), with high accuracy (∼90%). Baseline haemodynamics were found to be significantly different in the two identified states. During state defined periods of elevated baseline haemodynamics we found significant decreases in evoked haemodynamic responses to somatosensory stimuli. COMPARISON TO EXISTING METHODS: State classification – The ABSC (∼90%) demonstrated greater accuracy than clustering (∼66%) or ‘power threshold’ (∼64%) methods of comparison. Haemodynamic averaging – Our novel approach of selectively averaging stimulus evoked haemodynamic trials by brain state yields higher quality data than creating a single average from all trials. CONCLUSIONS: The ABSC can account for some of the commonly observed trial-to-trial variability in haemodynamic responses which arises from changes in cortical state. This variability might otherwise be incorrectly attributed to alternative interpretations. A greater understanding of the effects of cortical state on haemodynamic changes could be used to inform techniques such as general linear modelling (GLM), commonly used in fMRI. |
format | Online Article Text |
id | pubmed-4896992 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Elsevier/North-Holland Biomedical Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-48969922016-07-15 A novel method for classifying cortical state to identify the accompanying changes in cerebral hemodynamics Slack, R. Boorman, L. Patel, P. Harris, S. Bruyns-Haylett, M. Kennerley, A. Jones, M. Berwick, J. J Neurosci Methods Article BACKGROUND: Many brain imaging techniques interpret the haemodynamic response as an indirect indicator of underlying neural activity. However, a challenge when interpreting this blood based signal is how changes in brain state may affect both baseline and stimulus evoked haemodynamics. NEW METHOD: We developed an Automatic Brain State Classifier (ABSC), validated on data from anaesthetised rodents. It uses vectorised information obtained from the windowed spectral frequency power of the Local Field Potential. Current state is then classified by comparing this vectorised information against that calculated from state specific training datasets. RESULTS: The ABSC identified two user defined brain states (synchronised and desynchronised), with high accuracy (∼90%). Baseline haemodynamics were found to be significantly different in the two identified states. During state defined periods of elevated baseline haemodynamics we found significant decreases in evoked haemodynamic responses to somatosensory stimuli. COMPARISON TO EXISTING METHODS: State classification – The ABSC (∼90%) demonstrated greater accuracy than clustering (∼66%) or ‘power threshold’ (∼64%) methods of comparison. Haemodynamic averaging – Our novel approach of selectively averaging stimulus evoked haemodynamic trials by brain state yields higher quality data than creating a single average from all trials. CONCLUSIONS: The ABSC can account for some of the commonly observed trial-to-trial variability in haemodynamic responses which arises from changes in cortical state. This variability might otherwise be incorrectly attributed to alternative interpretations. A greater understanding of the effects of cortical state on haemodynamic changes could be used to inform techniques such as general linear modelling (GLM), commonly used in fMRI. Elsevier/North-Holland Biomedical Press 2016-07-15 /pmc/articles/PMC4896992/ /pubmed/27063501 http://dx.doi.org/10.1016/j.jneumeth.2016.04.005 Text en © 2016 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Slack, R. Boorman, L. Patel, P. Harris, S. Bruyns-Haylett, M. Kennerley, A. Jones, M. Berwick, J. A novel method for classifying cortical state to identify the accompanying changes in cerebral hemodynamics |
title | A novel method for classifying cortical state to identify the accompanying changes in cerebral hemodynamics |
title_full | A novel method for classifying cortical state to identify the accompanying changes in cerebral hemodynamics |
title_fullStr | A novel method for classifying cortical state to identify the accompanying changes in cerebral hemodynamics |
title_full_unstemmed | A novel method for classifying cortical state to identify the accompanying changes in cerebral hemodynamics |
title_short | A novel method for classifying cortical state to identify the accompanying changes in cerebral hemodynamics |
title_sort | novel method for classifying cortical state to identify the accompanying changes in cerebral hemodynamics |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4896992/ https://www.ncbi.nlm.nih.gov/pubmed/27063501 http://dx.doi.org/10.1016/j.jneumeth.2016.04.005 |
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