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A corpus of potentially contradictory research claims from cardiovascular research abstracts

BACKGROUND: Research literature in biomedicine and related fields contains a huge number of claims, such as the effectiveness of treatments. These claims are not always consistent and may even contradict each other. Being able to identify contradictory claims is important for those who rely on the b...

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Detalles Bibliográficos
Autores principales: Alamri, Abdulaziz, Stevenson, Mark
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4897929/
https://www.ncbi.nlm.nih.gov/pubmed/27267226
http://dx.doi.org/10.1186/s13326-016-0083-z
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author Alamri, Abdulaziz
Stevenson, Mark
author_facet Alamri, Abdulaziz
Stevenson, Mark
author_sort Alamri, Abdulaziz
collection PubMed
description BACKGROUND: Research literature in biomedicine and related fields contains a huge number of claims, such as the effectiveness of treatments. These claims are not always consistent and may even contradict each other. Being able to identify contradictory claims is important for those who rely on the biomedical literature. Automated methods to identify and resolve them are required to cope with the amount of information available. However, research in this area has been hampered by a lack of suitable resources. We describe a methodology to develop a corpus which addresses this gap by providing examples of potentially contradictory claims and demonstrate how it can be applied to identify these claims from Medline abstracts related to the topic of cardiovascular disease. METHODS: A set of systematic reviews concerned with four topics in cardiovascular disease were identified from Medline and analysed to determine whether the abstracts they reviewed contained contradictory research claims. For each review, annotators were asked to analyse these abstracts to identify claims within them that answered the question addressed in the review. The annotators were also asked to indicate how the claim related to that question and the type of the claim. RESULTS: A total of 259 abstracts associated with 24 systematic reviews were used to form the corpus. Agreement between the annotators was high, suggesting that the information they provided is reliable. CONCLUSIONS: The paper describes a methodology for constructing a corpus containing contradictory research claims from the biomedical literature. The corpus is made available to enable further research into this area and support the development of automated approaches to contradiction identification.
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spelling pubmed-48979292016-06-09 A corpus of potentially contradictory research claims from cardiovascular research abstracts Alamri, Abdulaziz Stevenson, Mark J Biomed Semantics Research BACKGROUND: Research literature in biomedicine and related fields contains a huge number of claims, such as the effectiveness of treatments. These claims are not always consistent and may even contradict each other. Being able to identify contradictory claims is important for those who rely on the biomedical literature. Automated methods to identify and resolve them are required to cope with the amount of information available. However, research in this area has been hampered by a lack of suitable resources. We describe a methodology to develop a corpus which addresses this gap by providing examples of potentially contradictory claims and demonstrate how it can be applied to identify these claims from Medline abstracts related to the topic of cardiovascular disease. METHODS: A set of systematic reviews concerned with four topics in cardiovascular disease were identified from Medline and analysed to determine whether the abstracts they reviewed contained contradictory research claims. For each review, annotators were asked to analyse these abstracts to identify claims within them that answered the question addressed in the review. The annotators were also asked to indicate how the claim related to that question and the type of the claim. RESULTS: A total of 259 abstracts associated with 24 systematic reviews were used to form the corpus. Agreement between the annotators was high, suggesting that the information they provided is reliable. CONCLUSIONS: The paper describes a methodology for constructing a corpus containing contradictory research claims from the biomedical literature. The corpus is made available to enable further research into this area and support the development of automated approaches to contradiction identification. BioMed Central 2016-06-07 /pmc/articles/PMC4897929/ /pubmed/27267226 http://dx.doi.org/10.1186/s13326-016-0083-z Text en © Alamri and Stevenson. 2016 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Alamri, Abdulaziz
Stevenson, Mark
A corpus of potentially contradictory research claims from cardiovascular research abstracts
title A corpus of potentially contradictory research claims from cardiovascular research abstracts
title_full A corpus of potentially contradictory research claims from cardiovascular research abstracts
title_fullStr A corpus of potentially contradictory research claims from cardiovascular research abstracts
title_full_unstemmed A corpus of potentially contradictory research claims from cardiovascular research abstracts
title_short A corpus of potentially contradictory research claims from cardiovascular research abstracts
title_sort corpus of potentially contradictory research claims from cardiovascular research abstracts
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4897929/
https://www.ncbi.nlm.nih.gov/pubmed/27267226
http://dx.doi.org/10.1186/s13326-016-0083-z
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