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Northeast India Helminth Parasite Information Database (NEIHPID): Knowledge Base for Helminth Parasites

Most metazoan parasites that invade vertebrate hosts belong to three phyla: Platyhelminthes, Nematoda and Acanthocephala. Many of the parasitic members of these phyla are collectively known as helminths and are causative agents of many debilitating, deforming and lethal diseases of humans and animal...

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Autores principales: Biswal, Devendra Kumar, Debnath, Manish, Kharumnuid, Graciously, Thongnibah, Welfrank, Tandon, Veena
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4902196/
https://www.ncbi.nlm.nih.gov/pubmed/27285615
http://dx.doi.org/10.1371/journal.pone.0157459
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author Biswal, Devendra Kumar
Debnath, Manish
Kharumnuid, Graciously
Thongnibah, Welfrank
Tandon, Veena
author_facet Biswal, Devendra Kumar
Debnath, Manish
Kharumnuid, Graciously
Thongnibah, Welfrank
Tandon, Veena
author_sort Biswal, Devendra Kumar
collection PubMed
description Most metazoan parasites that invade vertebrate hosts belong to three phyla: Platyhelminthes, Nematoda and Acanthocephala. Many of the parasitic members of these phyla are collectively known as helminths and are causative agents of many debilitating, deforming and lethal diseases of humans and animals. The North-East India Helminth Parasite Information Database (NEIHPID) project aimed to document and characterise the spectrum of helminth parasites in the north-eastern region of India, providing host, geographical distribution, diagnostic characters and image data. The morphology-based taxonomic data are supplemented with information on DNA sequences of nuclear, ribosomal and mitochondrial gene marker regions that aid in parasite identification. In addition, the database contains raw next generation sequencing (NGS) data for 3 foodborne trematode parasites, with more to follow. The database will also provide study material for students interested in parasite biology. Users can search the database at various taxonomic levels (phylum, class, order, superfamily, family, genus, and species), or by host, habitat and geographical location. Specimen collection locations are noted as co-ordinates in a MySQL database and can be viewed on Google maps, using Google Maps JavaScript API v3. The NEIHPID database has been made freely available at http://nepiac.nehu.ac.in/index.php
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spelling pubmed-49021962016-06-24 Northeast India Helminth Parasite Information Database (NEIHPID): Knowledge Base for Helminth Parasites Biswal, Devendra Kumar Debnath, Manish Kharumnuid, Graciously Thongnibah, Welfrank Tandon, Veena PLoS One Research Article Most metazoan parasites that invade vertebrate hosts belong to three phyla: Platyhelminthes, Nematoda and Acanthocephala. Many of the parasitic members of these phyla are collectively known as helminths and are causative agents of many debilitating, deforming and lethal diseases of humans and animals. The North-East India Helminth Parasite Information Database (NEIHPID) project aimed to document and characterise the spectrum of helminth parasites in the north-eastern region of India, providing host, geographical distribution, diagnostic characters and image data. The morphology-based taxonomic data are supplemented with information on DNA sequences of nuclear, ribosomal and mitochondrial gene marker regions that aid in parasite identification. In addition, the database contains raw next generation sequencing (NGS) data for 3 foodborne trematode parasites, with more to follow. The database will also provide study material for students interested in parasite biology. Users can search the database at various taxonomic levels (phylum, class, order, superfamily, family, genus, and species), or by host, habitat and geographical location. Specimen collection locations are noted as co-ordinates in a MySQL database and can be viewed on Google maps, using Google Maps JavaScript API v3. The NEIHPID database has been made freely available at http://nepiac.nehu.ac.in/index.php Public Library of Science 2016-06-10 /pmc/articles/PMC4902196/ /pubmed/27285615 http://dx.doi.org/10.1371/journal.pone.0157459 Text en © 2016 Biswal et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Biswal, Devendra Kumar
Debnath, Manish
Kharumnuid, Graciously
Thongnibah, Welfrank
Tandon, Veena
Northeast India Helminth Parasite Information Database (NEIHPID): Knowledge Base for Helminth Parasites
title Northeast India Helminth Parasite Information Database (NEIHPID): Knowledge Base for Helminth Parasites
title_full Northeast India Helminth Parasite Information Database (NEIHPID): Knowledge Base for Helminth Parasites
title_fullStr Northeast India Helminth Parasite Information Database (NEIHPID): Knowledge Base for Helminth Parasites
title_full_unstemmed Northeast India Helminth Parasite Information Database (NEIHPID): Knowledge Base for Helminth Parasites
title_short Northeast India Helminth Parasite Information Database (NEIHPID): Knowledge Base for Helminth Parasites
title_sort northeast india helminth parasite information database (neihpid): knowledge base for helminth parasites
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4902196/
https://www.ncbi.nlm.nih.gov/pubmed/27285615
http://dx.doi.org/10.1371/journal.pone.0157459
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