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Data on the kinetics of in vitro assembled chromatin

Here, we use LC–MS/MS and SWATH-MS to describe the kinetics of in vitro assembled chromatin supported by an embryo extract prepared from preblastoderm Drosophila melanogaster embryos (DREX). This system allows easy manipulation of distinct aspects of chromatin assembly such as post-translational his...

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Detalles Bibliográficos
Autores principales: Völker-Albert, Moritz Carl, Pusch, Miriam Caroline, Schmidt, Andreas, Imhof, Axel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4908269/
https://www.ncbi.nlm.nih.gov/pubmed/27331114
http://dx.doi.org/10.1016/j.dib.2016.05.057
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author Völker-Albert, Moritz Carl
Pusch, Miriam Caroline
Schmidt, Andreas
Imhof, Axel
author_facet Völker-Albert, Moritz Carl
Pusch, Miriam Caroline
Schmidt, Andreas
Imhof, Axel
author_sort Völker-Albert, Moritz Carl
collection PubMed
description Here, we use LC–MS/MS and SWATH-MS to describe the kinetics of in vitro assembled chromatin supported by an embryo extract prepared from preblastoderm Drosophila melanogaster embryos (DREX). This system allows easy manipulation of distinct aspects of chromatin assembly such as post-translational histone modifications, the levels of histone chaperones and the concentration of distinct DNA binding factors. In total, 480 proteins have been quantified as chromatin enriched factors and their binding kinetics have been monitored in the time course of 15 min, 1 h and 4 h of chromatin assembly. The data accompanying the manuscript on this approach, Völker-Albert et al., 2016 “A quantitative proteomic analysis of in vitro assembled chromatin” [1], has been deposited to the ProteomeXchange Consortium (http://www.proteomexchange.org) via the PRIDE partner repository with the dataset identifier submission number PRIDE: PXD002537 and PRIDE: PXD003445.
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spelling pubmed-49082692016-06-21 Data on the kinetics of in vitro assembled chromatin Völker-Albert, Moritz Carl Pusch, Miriam Caroline Schmidt, Andreas Imhof, Axel Data Brief Data Article Here, we use LC–MS/MS and SWATH-MS to describe the kinetics of in vitro assembled chromatin supported by an embryo extract prepared from preblastoderm Drosophila melanogaster embryos (DREX). This system allows easy manipulation of distinct aspects of chromatin assembly such as post-translational histone modifications, the levels of histone chaperones and the concentration of distinct DNA binding factors. In total, 480 proteins have been quantified as chromatin enriched factors and their binding kinetics have been monitored in the time course of 15 min, 1 h and 4 h of chromatin assembly. The data accompanying the manuscript on this approach, Völker-Albert et al., 2016 “A quantitative proteomic analysis of in vitro assembled chromatin” [1], has been deposited to the ProteomeXchange Consortium (http://www.proteomexchange.org) via the PRIDE partner repository with the dataset identifier submission number PRIDE: PXD002537 and PRIDE: PXD003445. Elsevier 2016-06-01 /pmc/articles/PMC4908269/ /pubmed/27331114 http://dx.doi.org/10.1016/j.dib.2016.05.057 Text en © 2016 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Völker-Albert, Moritz Carl
Pusch, Miriam Caroline
Schmidt, Andreas
Imhof, Axel
Data on the kinetics of in vitro assembled chromatin
title Data on the kinetics of in vitro assembled chromatin
title_full Data on the kinetics of in vitro assembled chromatin
title_fullStr Data on the kinetics of in vitro assembled chromatin
title_full_unstemmed Data on the kinetics of in vitro assembled chromatin
title_short Data on the kinetics of in vitro assembled chromatin
title_sort data on the kinetics of in vitro assembled chromatin
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4908269/
https://www.ncbi.nlm.nih.gov/pubmed/27331114
http://dx.doi.org/10.1016/j.dib.2016.05.057
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