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Data on the kinetics of in vitro assembled chromatin
Here, we use LC–MS/MS and SWATH-MS to describe the kinetics of in vitro assembled chromatin supported by an embryo extract prepared from preblastoderm Drosophila melanogaster embryos (DREX). This system allows easy manipulation of distinct aspects of chromatin assembly such as post-translational his...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4908269/ https://www.ncbi.nlm.nih.gov/pubmed/27331114 http://dx.doi.org/10.1016/j.dib.2016.05.057 |
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author | Völker-Albert, Moritz Carl Pusch, Miriam Caroline Schmidt, Andreas Imhof, Axel |
author_facet | Völker-Albert, Moritz Carl Pusch, Miriam Caroline Schmidt, Andreas Imhof, Axel |
author_sort | Völker-Albert, Moritz Carl |
collection | PubMed |
description | Here, we use LC–MS/MS and SWATH-MS to describe the kinetics of in vitro assembled chromatin supported by an embryo extract prepared from preblastoderm Drosophila melanogaster embryos (DREX). This system allows easy manipulation of distinct aspects of chromatin assembly such as post-translational histone modifications, the levels of histone chaperones and the concentration of distinct DNA binding factors. In total, 480 proteins have been quantified as chromatin enriched factors and their binding kinetics have been monitored in the time course of 15 min, 1 h and 4 h of chromatin assembly. The data accompanying the manuscript on this approach, Völker-Albert et al., 2016 “A quantitative proteomic analysis of in vitro assembled chromatin” [1], has been deposited to the ProteomeXchange Consortium (http://www.proteomexchange.org) via the PRIDE partner repository with the dataset identifier submission number PRIDE: PXD002537 and PRIDE: PXD003445. |
format | Online Article Text |
id | pubmed-4908269 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-49082692016-06-21 Data on the kinetics of in vitro assembled chromatin Völker-Albert, Moritz Carl Pusch, Miriam Caroline Schmidt, Andreas Imhof, Axel Data Brief Data Article Here, we use LC–MS/MS and SWATH-MS to describe the kinetics of in vitro assembled chromatin supported by an embryo extract prepared from preblastoderm Drosophila melanogaster embryos (DREX). This system allows easy manipulation of distinct aspects of chromatin assembly such as post-translational histone modifications, the levels of histone chaperones and the concentration of distinct DNA binding factors. In total, 480 proteins have been quantified as chromatin enriched factors and their binding kinetics have been monitored in the time course of 15 min, 1 h and 4 h of chromatin assembly. The data accompanying the manuscript on this approach, Völker-Albert et al., 2016 “A quantitative proteomic analysis of in vitro assembled chromatin” [1], has been deposited to the ProteomeXchange Consortium (http://www.proteomexchange.org) via the PRIDE partner repository with the dataset identifier submission number PRIDE: PXD002537 and PRIDE: PXD003445. Elsevier 2016-06-01 /pmc/articles/PMC4908269/ /pubmed/27331114 http://dx.doi.org/10.1016/j.dib.2016.05.057 Text en © 2016 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data Article Völker-Albert, Moritz Carl Pusch, Miriam Caroline Schmidt, Andreas Imhof, Axel Data on the kinetics of in vitro assembled chromatin |
title | Data on the kinetics of in vitro assembled chromatin |
title_full | Data on the kinetics of in vitro assembled chromatin |
title_fullStr | Data on the kinetics of in vitro assembled chromatin |
title_full_unstemmed | Data on the kinetics of in vitro assembled chromatin |
title_short | Data on the kinetics of in vitro assembled chromatin |
title_sort | data on the kinetics of in vitro assembled chromatin |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4908269/ https://www.ncbi.nlm.nih.gov/pubmed/27331114 http://dx.doi.org/10.1016/j.dib.2016.05.057 |
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