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Bio-Inspired Controller on an FPGA Applied to Closed-Loop Diaphragmatic Stimulation

Cervical spinal cord injury can disrupt connections between the brain respiratory network and the respiratory muscles which can lead to partial or complete loss of ventilatory control and require ventilatory assistance. Unlike current open-loop technology, a closed-loop diaphragmatic pacing system c...

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Autores principales: Zbrzeski, Adeline, Bornat, Yannick, Hillen, Brian, Siu, Ricardo, Abbas, James, Jung, Ranu, Renaud, Sylvie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4909776/
https://www.ncbi.nlm.nih.gov/pubmed/27378844
http://dx.doi.org/10.3389/fnins.2016.00275
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author Zbrzeski, Adeline
Bornat, Yannick
Hillen, Brian
Siu, Ricardo
Abbas, James
Jung, Ranu
Renaud, Sylvie
author_facet Zbrzeski, Adeline
Bornat, Yannick
Hillen, Brian
Siu, Ricardo
Abbas, James
Jung, Ranu
Renaud, Sylvie
author_sort Zbrzeski, Adeline
collection PubMed
description Cervical spinal cord injury can disrupt connections between the brain respiratory network and the respiratory muscles which can lead to partial or complete loss of ventilatory control and require ventilatory assistance. Unlike current open-loop technology, a closed-loop diaphragmatic pacing system could overcome the drawbacks of manual titration as well as respond to changing ventilation requirements. We present an original bio-inspired assistive technology for real-time ventilation assistance, implemented in a digital configurable Field Programmable Gate Array (FPGA). The bio-inspired controller, which is a spiking neural network (SNN) inspired by the medullary respiratory network, is as robust as a classic controller while having a flexible, low-power and low-cost hardware design. The system was simulated in MATLAB with FPGA-specific constraints and tested with a computational model of rat breathing; the model reproduced experimentally collected respiratory data in eupneic animals. The open-loop version of the bio-inspired controller was implemented on the FPGA. Electrical test bench characterizations confirmed the system functionality. Open and closed-loop paradigm simulations were simulated to test the FPGA system real-time behavior using the rat computational model. The closed-loop system monitors breathing and changes in respiratory demands to drive diaphragmatic stimulation. The simulated results inform future acute animal experiments and constitute the first step toward the development of a neuromorphic, adaptive, compact, low-power, implantable device. The bio-inspired hardware design optimizes the FPGA resource and time costs while harnessing the computational power of spike-based neuromorphic hardware. Its real-time feature makes it suitable for in vivo applications.
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spelling pubmed-49097762016-07-04 Bio-Inspired Controller on an FPGA Applied to Closed-Loop Diaphragmatic Stimulation Zbrzeski, Adeline Bornat, Yannick Hillen, Brian Siu, Ricardo Abbas, James Jung, Ranu Renaud, Sylvie Front Neurosci Neuroscience Cervical spinal cord injury can disrupt connections between the brain respiratory network and the respiratory muscles which can lead to partial or complete loss of ventilatory control and require ventilatory assistance. Unlike current open-loop technology, a closed-loop diaphragmatic pacing system could overcome the drawbacks of manual titration as well as respond to changing ventilation requirements. We present an original bio-inspired assistive technology for real-time ventilation assistance, implemented in a digital configurable Field Programmable Gate Array (FPGA). The bio-inspired controller, which is a spiking neural network (SNN) inspired by the medullary respiratory network, is as robust as a classic controller while having a flexible, low-power and low-cost hardware design. The system was simulated in MATLAB with FPGA-specific constraints and tested with a computational model of rat breathing; the model reproduced experimentally collected respiratory data in eupneic animals. The open-loop version of the bio-inspired controller was implemented on the FPGA. Electrical test bench characterizations confirmed the system functionality. Open and closed-loop paradigm simulations were simulated to test the FPGA system real-time behavior using the rat computational model. The closed-loop system monitors breathing and changes in respiratory demands to drive diaphragmatic stimulation. The simulated results inform future acute animal experiments and constitute the first step toward the development of a neuromorphic, adaptive, compact, low-power, implantable device. The bio-inspired hardware design optimizes the FPGA resource and time costs while harnessing the computational power of spike-based neuromorphic hardware. Its real-time feature makes it suitable for in vivo applications. Frontiers Media S.A. 2016-06-16 /pmc/articles/PMC4909776/ /pubmed/27378844 http://dx.doi.org/10.3389/fnins.2016.00275 Text en Copyright © 2016 Zbrzeski, Bornat, Hillen, Siu, Abbas, Jung and Renaud. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Zbrzeski, Adeline
Bornat, Yannick
Hillen, Brian
Siu, Ricardo
Abbas, James
Jung, Ranu
Renaud, Sylvie
Bio-Inspired Controller on an FPGA Applied to Closed-Loop Diaphragmatic Stimulation
title Bio-Inspired Controller on an FPGA Applied to Closed-Loop Diaphragmatic Stimulation
title_full Bio-Inspired Controller on an FPGA Applied to Closed-Loop Diaphragmatic Stimulation
title_fullStr Bio-Inspired Controller on an FPGA Applied to Closed-Loop Diaphragmatic Stimulation
title_full_unstemmed Bio-Inspired Controller on an FPGA Applied to Closed-Loop Diaphragmatic Stimulation
title_short Bio-Inspired Controller on an FPGA Applied to Closed-Loop Diaphragmatic Stimulation
title_sort bio-inspired controller on an fpga applied to closed-loop diaphragmatic stimulation
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4909776/
https://www.ncbi.nlm.nih.gov/pubmed/27378844
http://dx.doi.org/10.3389/fnins.2016.00275
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