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Genome annotation of a Saccharomyces sp. lager brewer's yeast
The genome of lager brewer's yeast is a hybrid, with Saccharomyces eubayanus and Saccharomyces cerevisiae as sub-genomes. Due to their specific use in the beer industry, relatively little information is available. The genome of brewing yeast was sequenced and annotated in this study. We obtaine...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4909825/ https://www.ncbi.nlm.nih.gov/pubmed/27330999 http://dx.doi.org/10.1016/j.gdata.2016.05.009 |
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author | De León-Medina, Patricia Marcela Elizondo-González, Ramiro Damas-Buenrostro, Luis Cástulo Geertman, Jan-Maarten Van den Broek, Marcel Galán-Wong, Luis Jesús Ortiz-López, Rocío Pereyra-Alférez, Benito |
author_facet | De León-Medina, Patricia Marcela Elizondo-González, Ramiro Damas-Buenrostro, Luis Cástulo Geertman, Jan-Maarten Van den Broek, Marcel Galán-Wong, Luis Jesús Ortiz-López, Rocío Pereyra-Alférez, Benito |
author_sort | De León-Medina, Patricia Marcela |
collection | PubMed |
description | The genome of lager brewer's yeast is a hybrid, with Saccharomyces eubayanus and Saccharomyces cerevisiae as sub-genomes. Due to their specific use in the beer industry, relatively little information is available. The genome of brewing yeast was sequenced and annotated in this study. We obtained a genome size of 22.7 Mbp that consisted of 133 scaffolds, with 65 scaffolds larger than 10 kbp. With respect to the annotation, 9939 genes were obtained, and when they were submitted to a local alignment, we found that 53.93% of these genes corresponded to S. cerevisiae, while another 42.86% originated from S. eubayanus. Our results confirm that our strain is a hybrid of at least two different genomes. |
format | Online Article Text |
id | pubmed-4909825 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-49098252016-06-21 Genome annotation of a Saccharomyces sp. lager brewer's yeast De León-Medina, Patricia Marcela Elizondo-González, Ramiro Damas-Buenrostro, Luis Cástulo Geertman, Jan-Maarten Van den Broek, Marcel Galán-Wong, Luis Jesús Ortiz-López, Rocío Pereyra-Alférez, Benito Genom Data Regular Article The genome of lager brewer's yeast is a hybrid, with Saccharomyces eubayanus and Saccharomyces cerevisiae as sub-genomes. Due to their specific use in the beer industry, relatively little information is available. The genome of brewing yeast was sequenced and annotated in this study. We obtained a genome size of 22.7 Mbp that consisted of 133 scaffolds, with 65 scaffolds larger than 10 kbp. With respect to the annotation, 9939 genes were obtained, and when they were submitted to a local alignment, we found that 53.93% of these genes corresponded to S. cerevisiae, while another 42.86% originated from S. eubayanus. Our results confirm that our strain is a hybrid of at least two different genomes. Elsevier 2016-05-21 /pmc/articles/PMC4909825/ /pubmed/27330999 http://dx.doi.org/10.1016/j.gdata.2016.05.009 Text en © 2016 Asbestos Diseases Research Institute, Sydney Australia http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Regular Article De León-Medina, Patricia Marcela Elizondo-González, Ramiro Damas-Buenrostro, Luis Cástulo Geertman, Jan-Maarten Van den Broek, Marcel Galán-Wong, Luis Jesús Ortiz-López, Rocío Pereyra-Alférez, Benito Genome annotation of a Saccharomyces sp. lager brewer's yeast |
title | Genome annotation of a Saccharomyces sp. lager brewer's yeast |
title_full | Genome annotation of a Saccharomyces sp. lager brewer's yeast |
title_fullStr | Genome annotation of a Saccharomyces sp. lager brewer's yeast |
title_full_unstemmed | Genome annotation of a Saccharomyces sp. lager brewer's yeast |
title_short | Genome annotation of a Saccharomyces sp. lager brewer's yeast |
title_sort | genome annotation of a saccharomyces sp. lager brewer's yeast |
topic | Regular Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4909825/ https://www.ncbi.nlm.nih.gov/pubmed/27330999 http://dx.doi.org/10.1016/j.gdata.2016.05.009 |
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