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Rapid spread of influenza A(H1N1)pdm09 viruses with a new set of specific mutations in the internal genes in the beginning of 2015/2016 epidemic season in Moscow and Saint Petersburg (Russian Federation)

A dramatic increase of influenza activity in Russia since week 3 of 2016 significantly differs from previous seasons in terms of the incidence of influenza and acute respiratory infection (ARI) and in number of lethal cases. We performed antigenic analysis of 108 and whole‐genome sequencing of 77 in...

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Autores principales: Komissarov, Andrey, Fadeev, Artem, Sergeeva, Maria, Petrov, Sergey, Sintsova, Kseniya, Egorova, Anna, Pisareva, Maria, Buzitskaya, Zhanna, Musaeva, Tamila, Danilenko, Daria, Konovalova, Nadezhda, Petrova, Polina, Stolyarov, Kirill, Smorodintseva, Elizaveta, Burtseva, Elena, Krasnoslobodtsev, Kirill, Kirillova, Elena, Karpova, Lyudmila, Eropkin, Mikhail, Sominina, Anna, Grudinin, Mikhail
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4910175/
https://www.ncbi.nlm.nih.gov/pubmed/26992820
http://dx.doi.org/10.1111/irv.12389
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author Komissarov, Andrey
Fadeev, Artem
Sergeeva, Maria
Petrov, Sergey
Sintsova, Kseniya
Egorova, Anna
Pisareva, Maria
Buzitskaya, Zhanna
Musaeva, Tamila
Danilenko, Daria
Konovalova, Nadezhda
Petrova, Polina
Stolyarov, Kirill
Smorodintseva, Elizaveta
Burtseva, Elena
Krasnoslobodtsev, Kirill
Kirillova, Elena
Karpova, Lyudmila
Eropkin, Mikhail
Sominina, Anna
Grudinin, Mikhail
author_facet Komissarov, Andrey
Fadeev, Artem
Sergeeva, Maria
Petrov, Sergey
Sintsova, Kseniya
Egorova, Anna
Pisareva, Maria
Buzitskaya, Zhanna
Musaeva, Tamila
Danilenko, Daria
Konovalova, Nadezhda
Petrova, Polina
Stolyarov, Kirill
Smorodintseva, Elizaveta
Burtseva, Elena
Krasnoslobodtsev, Kirill
Kirillova, Elena
Karpova, Lyudmila
Eropkin, Mikhail
Sominina, Anna
Grudinin, Mikhail
author_sort Komissarov, Andrey
collection PubMed
description A dramatic increase of influenza activity in Russia since week 3 of 2016 significantly differs from previous seasons in terms of the incidence of influenza and acute respiratory infection (ARI) and in number of lethal cases. We performed antigenic analysis of 108 and whole‐genome sequencing of 77 influenza A(H1N1)pdm09 viruses from Moscow and Saint Petersburg. Most of the viruses were antigenically related to the vaccine strain. Whole‐genome analysis revealed a composition of specific mutations in the internal genes (D2E and M83I in NEP, E125D in NS1, M105T in NP, Q208K in M1, and N204S in PA‐X) that probably emerged before the beginning of 2015/2016 epidemic season.
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spelling pubmed-49101752016-07-01 Rapid spread of influenza A(H1N1)pdm09 viruses with a new set of specific mutations in the internal genes in the beginning of 2015/2016 epidemic season in Moscow and Saint Petersburg (Russian Federation) Komissarov, Andrey Fadeev, Artem Sergeeva, Maria Petrov, Sergey Sintsova, Kseniya Egorova, Anna Pisareva, Maria Buzitskaya, Zhanna Musaeva, Tamila Danilenko, Daria Konovalova, Nadezhda Petrova, Polina Stolyarov, Kirill Smorodintseva, Elizaveta Burtseva, Elena Krasnoslobodtsev, Kirill Kirillova, Elena Karpova, Lyudmila Eropkin, Mikhail Sominina, Anna Grudinin, Mikhail Influenza Other Respir Viruses Short Article A dramatic increase of influenza activity in Russia since week 3 of 2016 significantly differs from previous seasons in terms of the incidence of influenza and acute respiratory infection (ARI) and in number of lethal cases. We performed antigenic analysis of 108 and whole‐genome sequencing of 77 influenza A(H1N1)pdm09 viruses from Moscow and Saint Petersburg. Most of the viruses were antigenically related to the vaccine strain. Whole‐genome analysis revealed a composition of specific mutations in the internal genes (D2E and M83I in NEP, E125D in NS1, M105T in NP, Q208K in M1, and N204S in PA‐X) that probably emerged before the beginning of 2015/2016 epidemic season. John Wiley and Sons Inc. 2016-05-27 2016-07 /pmc/articles/PMC4910175/ /pubmed/26992820 http://dx.doi.org/10.1111/irv.12389 Text en © 2016 The Authors. Influenza and Other Respiratory Viruses Published by John Wiley & Sons Ltd. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Article
Komissarov, Andrey
Fadeev, Artem
Sergeeva, Maria
Petrov, Sergey
Sintsova, Kseniya
Egorova, Anna
Pisareva, Maria
Buzitskaya, Zhanna
Musaeva, Tamila
Danilenko, Daria
Konovalova, Nadezhda
Petrova, Polina
Stolyarov, Kirill
Smorodintseva, Elizaveta
Burtseva, Elena
Krasnoslobodtsev, Kirill
Kirillova, Elena
Karpova, Lyudmila
Eropkin, Mikhail
Sominina, Anna
Grudinin, Mikhail
Rapid spread of influenza A(H1N1)pdm09 viruses with a new set of specific mutations in the internal genes in the beginning of 2015/2016 epidemic season in Moscow and Saint Petersburg (Russian Federation)
title Rapid spread of influenza A(H1N1)pdm09 viruses with a new set of specific mutations in the internal genes in the beginning of 2015/2016 epidemic season in Moscow and Saint Petersburg (Russian Federation)
title_full Rapid spread of influenza A(H1N1)pdm09 viruses with a new set of specific mutations in the internal genes in the beginning of 2015/2016 epidemic season in Moscow and Saint Petersburg (Russian Federation)
title_fullStr Rapid spread of influenza A(H1N1)pdm09 viruses with a new set of specific mutations in the internal genes in the beginning of 2015/2016 epidemic season in Moscow and Saint Petersburg (Russian Federation)
title_full_unstemmed Rapid spread of influenza A(H1N1)pdm09 viruses with a new set of specific mutations in the internal genes in the beginning of 2015/2016 epidemic season in Moscow and Saint Petersburg (Russian Federation)
title_short Rapid spread of influenza A(H1N1)pdm09 viruses with a new set of specific mutations in the internal genes in the beginning of 2015/2016 epidemic season in Moscow and Saint Petersburg (Russian Federation)
title_sort rapid spread of influenza a(h1n1)pdm09 viruses with a new set of specific mutations in the internal genes in the beginning of 2015/2016 epidemic season in moscow and saint petersburg (russian federation)
topic Short Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4910175/
https://www.ncbi.nlm.nih.gov/pubmed/26992820
http://dx.doi.org/10.1111/irv.12389
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