Cargando…

Agent-Based Deterministic Modeling of the Bone Marrow Homeostasis

Modeling of stem cells not only describes but also predicts how a stem cell's environment can control its fate. The first stem cell populations discovered were hematopoietic stem cells (HSCs). In this paper, we present a deterministic model of bone marrow (that hosts HSCs) that is consistent wi...

Descripción completa

Detalles Bibliográficos
Autores principales: Kurhekar, Manish, Deshpande, Umesh
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4910184/
https://www.ncbi.nlm.nih.gov/pubmed/27340402
http://dx.doi.org/10.1155/2016/8054219
_version_ 1782437966165049344
author Kurhekar, Manish
Deshpande, Umesh
author_facet Kurhekar, Manish
Deshpande, Umesh
author_sort Kurhekar, Manish
collection PubMed
description Modeling of stem cells not only describes but also predicts how a stem cell's environment can control its fate. The first stem cell populations discovered were hematopoietic stem cells (HSCs). In this paper, we present a deterministic model of bone marrow (that hosts HSCs) that is consistent with several of the qualitative biological observations. This model incorporates stem cell death (apoptosis) after a certain number of cell divisions and also demonstrates that a single HSC can potentially populate the entire bone marrow. It also demonstrates that there is a production of sufficient number of differentiated cells (RBCs, WBCs, etc.). We prove that our model of bone marrow is biologically consistent and it overcomes the biological feasibility limitations of previously reported models. The major contribution of our model is the flexibility it allows in choosing model parameters which permits several different simulations to be carried out in silico without affecting the homeostatic properties of the model. We have also performed agent-based simulation of the model of bone marrow system proposed in this paper. We have also included parameter details and the results obtained from the simulation. The program of the agent-based simulation of the proposed model is made available on a publicly accessible website.
format Online
Article
Text
id pubmed-4910184
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Hindawi Publishing Corporation
record_format MEDLINE/PubMed
spelling pubmed-49101842016-06-23 Agent-Based Deterministic Modeling of the Bone Marrow Homeostasis Kurhekar, Manish Deshpande, Umesh Adv Bioinformatics Research Article Modeling of stem cells not only describes but also predicts how a stem cell's environment can control its fate. The first stem cell populations discovered were hematopoietic stem cells (HSCs). In this paper, we present a deterministic model of bone marrow (that hosts HSCs) that is consistent with several of the qualitative biological observations. This model incorporates stem cell death (apoptosis) after a certain number of cell divisions and also demonstrates that a single HSC can potentially populate the entire bone marrow. It also demonstrates that there is a production of sufficient number of differentiated cells (RBCs, WBCs, etc.). We prove that our model of bone marrow is biologically consistent and it overcomes the biological feasibility limitations of previously reported models. The major contribution of our model is the flexibility it allows in choosing model parameters which permits several different simulations to be carried out in silico without affecting the homeostatic properties of the model. We have also performed agent-based simulation of the model of bone marrow system proposed in this paper. We have also included parameter details and the results obtained from the simulation. The program of the agent-based simulation of the proposed model is made available on a publicly accessible website. Hindawi Publishing Corporation 2016 2016-06-02 /pmc/articles/PMC4910184/ /pubmed/27340402 http://dx.doi.org/10.1155/2016/8054219 Text en Copyright © 2016 M. Kurhekar and U. Deshpande. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Kurhekar, Manish
Deshpande, Umesh
Agent-Based Deterministic Modeling of the Bone Marrow Homeostasis
title Agent-Based Deterministic Modeling of the Bone Marrow Homeostasis
title_full Agent-Based Deterministic Modeling of the Bone Marrow Homeostasis
title_fullStr Agent-Based Deterministic Modeling of the Bone Marrow Homeostasis
title_full_unstemmed Agent-Based Deterministic Modeling of the Bone Marrow Homeostasis
title_short Agent-Based Deterministic Modeling of the Bone Marrow Homeostasis
title_sort agent-based deterministic modeling of the bone marrow homeostasis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4910184/
https://www.ncbi.nlm.nih.gov/pubmed/27340402
http://dx.doi.org/10.1155/2016/8054219
work_keys_str_mv AT kurhekarmanish agentbaseddeterministicmodelingofthebonemarrowhomeostasis
AT deshpandeumesh agentbaseddeterministicmodelingofthebonemarrowhomeostasis