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Hypothetical granulin-like molecule from Fasciola hepatica identified by bioinformatics analysis

Fasciola hepatica is considered an emergent human pathogen, causing liver fibrosis or cirrhosis, conditions that are known to be direct causes of cancer. Some parasites have been categorized by WHO as carcinogenic agents such as Opisthorchis viverrini, a relative of F. hepatica. Although these two p...

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Autores principales: Machicado, Claudia, Marcos, Luis A., Zimic, Mirko
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4912509/
https://www.ncbi.nlm.nih.gov/pubmed/27386259
http://dx.doi.org/10.1186/s40064-016-2443-7
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author Machicado, Claudia
Marcos, Luis A.
Zimic, Mirko
author_facet Machicado, Claudia
Marcos, Luis A.
Zimic, Mirko
author_sort Machicado, Claudia
collection PubMed
description Fasciola hepatica is considered an emergent human pathogen, causing liver fibrosis or cirrhosis, conditions that are known to be direct causes of cancer. Some parasites have been categorized by WHO as carcinogenic agents such as Opisthorchis viverrini, a relative of F. hepatica. Although these two parasites are from the same class (Trematoda), the role of F. hepatica in carcinogenesis is unclear. We hypothesized that F. hepatica might share some features with O. viverrini and to be responsible to induce proliferation of host cells. We analyzed the recently released genome of F. hepatica looking for a gene coding a granulin-like growth factor, a protein secreted by O. viverrini (Ov-GRN-1), which is a potent stimulator of proliferation of host cells. Using computational biology tools, we identified a granulin-like molecule in F. hepatica, here termed FhGLM, which has high sequence identity level to Ov-GRN-1 and human progranulin. We found evidence of an upstream promoter compatible with the expression of FhGLM. The FhGLM architecture showed to have five granulin domains, one of them, the domain 3, was homologue to Ov-GRN-1 and human GRNC. The structure of the FhGLM granulin domain 3 resulted to have the overall folding of its homologue the human GRNC. Our findings show the presence of a homologue of a potent modulator of cell growth in F. hepatica that might have, as other granulins, a proliferative action on host cells during fascioliasis. Future experimental assays to demonstrate the presence of FhGLM in F. hepatica are needed to confirm our hypothesis.
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spelling pubmed-49125092016-07-06 Hypothetical granulin-like molecule from Fasciola hepatica identified by bioinformatics analysis Machicado, Claudia Marcos, Luis A. Zimic, Mirko Springerplus Research Fasciola hepatica is considered an emergent human pathogen, causing liver fibrosis or cirrhosis, conditions that are known to be direct causes of cancer. Some parasites have been categorized by WHO as carcinogenic agents such as Opisthorchis viverrini, a relative of F. hepatica. Although these two parasites are from the same class (Trematoda), the role of F. hepatica in carcinogenesis is unclear. We hypothesized that F. hepatica might share some features with O. viverrini and to be responsible to induce proliferation of host cells. We analyzed the recently released genome of F. hepatica looking for a gene coding a granulin-like growth factor, a protein secreted by O. viverrini (Ov-GRN-1), which is a potent stimulator of proliferation of host cells. Using computational biology tools, we identified a granulin-like molecule in F. hepatica, here termed FhGLM, which has high sequence identity level to Ov-GRN-1 and human progranulin. We found evidence of an upstream promoter compatible with the expression of FhGLM. The FhGLM architecture showed to have five granulin domains, one of them, the domain 3, was homologue to Ov-GRN-1 and human GRNC. The structure of the FhGLM granulin domain 3 resulted to have the overall folding of its homologue the human GRNC. Our findings show the presence of a homologue of a potent modulator of cell growth in F. hepatica that might have, as other granulins, a proliferative action on host cells during fascioliasis. Future experimental assays to demonstrate the presence of FhGLM in F. hepatica are needed to confirm our hypothesis. Springer International Publishing 2016-06-17 /pmc/articles/PMC4912509/ /pubmed/27386259 http://dx.doi.org/10.1186/s40064-016-2443-7 Text en © The Author(s) 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Research
Machicado, Claudia
Marcos, Luis A.
Zimic, Mirko
Hypothetical granulin-like molecule from Fasciola hepatica identified by bioinformatics analysis
title Hypothetical granulin-like molecule from Fasciola hepatica identified by bioinformatics analysis
title_full Hypothetical granulin-like molecule from Fasciola hepatica identified by bioinformatics analysis
title_fullStr Hypothetical granulin-like molecule from Fasciola hepatica identified by bioinformatics analysis
title_full_unstemmed Hypothetical granulin-like molecule from Fasciola hepatica identified by bioinformatics analysis
title_short Hypothetical granulin-like molecule from Fasciola hepatica identified by bioinformatics analysis
title_sort hypothetical granulin-like molecule from fasciola hepatica identified by bioinformatics analysis
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4912509/
https://www.ncbi.nlm.nih.gov/pubmed/27386259
http://dx.doi.org/10.1186/s40064-016-2443-7
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