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Robustness of MEK-ERK Dynamics and Origins of Cell-to-Cell Variability in MAPK Signaling

Cellular signaling processes can exhibit pronounced cell-to-cell variability in genetically identical cells. This affects how individual cells respond differentially to the same environmental stimulus. However, the origins of cell-to-cell variability in cellular signaling systems remain poorly under...

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Autores principales: Filippi, Sarah, Barnes, Chris P., Kirk, Paul D.W., Kudo, Takamasa, Kunida, Katsuyuki, McMahon, Siobhan S., Tsuchiya, Takaho, Wada, Takumi, Kuroda, Shinya, Stumpf, Michael P.H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cell Press 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4914773/
https://www.ncbi.nlm.nih.gov/pubmed/27264188
http://dx.doi.org/10.1016/j.celrep.2016.05.024
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author Filippi, Sarah
Barnes, Chris P.
Kirk, Paul D.W.
Kudo, Takamasa
Kunida, Katsuyuki
McMahon, Siobhan S.
Tsuchiya, Takaho
Wada, Takumi
Kuroda, Shinya
Stumpf, Michael P.H.
author_facet Filippi, Sarah
Barnes, Chris P.
Kirk, Paul D.W.
Kudo, Takamasa
Kunida, Katsuyuki
McMahon, Siobhan S.
Tsuchiya, Takaho
Wada, Takumi
Kuroda, Shinya
Stumpf, Michael P.H.
author_sort Filippi, Sarah
collection PubMed
description Cellular signaling processes can exhibit pronounced cell-to-cell variability in genetically identical cells. This affects how individual cells respond differentially to the same environmental stimulus. However, the origins of cell-to-cell variability in cellular signaling systems remain poorly understood. Here, we measure the dynamics of phosphorylated MEK and ERK across cell populations and quantify the levels of population heterogeneity over time using high-throughput image cytometry. We use a statistical modeling framework to show that extrinsic noise, particularly that from upstream MEK, is the dominant factor causing cell-to-cell variability in ERK phosphorylation, rather than stochasticity in the phosphorylation/dephosphorylation of ERK. We furthermore show that without extrinsic noise in the core module, variable (including noisy) signals would be faithfully reproduced downstream, but the within-module extrinsic variability distorts these signals and leads to a drastic reduction in the mutual information between incoming signal and ERK activity.
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spelling pubmed-49147732016-06-29 Robustness of MEK-ERK Dynamics and Origins of Cell-to-Cell Variability in MAPK Signaling Filippi, Sarah Barnes, Chris P. Kirk, Paul D.W. Kudo, Takamasa Kunida, Katsuyuki McMahon, Siobhan S. Tsuchiya, Takaho Wada, Takumi Kuroda, Shinya Stumpf, Michael P.H. Cell Rep Article Cellular signaling processes can exhibit pronounced cell-to-cell variability in genetically identical cells. This affects how individual cells respond differentially to the same environmental stimulus. However, the origins of cell-to-cell variability in cellular signaling systems remain poorly understood. Here, we measure the dynamics of phosphorylated MEK and ERK across cell populations and quantify the levels of population heterogeneity over time using high-throughput image cytometry. We use a statistical modeling framework to show that extrinsic noise, particularly that from upstream MEK, is the dominant factor causing cell-to-cell variability in ERK phosphorylation, rather than stochasticity in the phosphorylation/dephosphorylation of ERK. We furthermore show that without extrinsic noise in the core module, variable (including noisy) signals would be faithfully reproduced downstream, but the within-module extrinsic variability distorts these signals and leads to a drastic reduction in the mutual information between incoming signal and ERK activity. Cell Press 2016-06-02 /pmc/articles/PMC4914773/ /pubmed/27264188 http://dx.doi.org/10.1016/j.celrep.2016.05.024 Text en © 2016 The Author(s) http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Filippi, Sarah
Barnes, Chris P.
Kirk, Paul D.W.
Kudo, Takamasa
Kunida, Katsuyuki
McMahon, Siobhan S.
Tsuchiya, Takaho
Wada, Takumi
Kuroda, Shinya
Stumpf, Michael P.H.
Robustness of MEK-ERK Dynamics and Origins of Cell-to-Cell Variability in MAPK Signaling
title Robustness of MEK-ERK Dynamics and Origins of Cell-to-Cell Variability in MAPK Signaling
title_full Robustness of MEK-ERK Dynamics and Origins of Cell-to-Cell Variability in MAPK Signaling
title_fullStr Robustness of MEK-ERK Dynamics and Origins of Cell-to-Cell Variability in MAPK Signaling
title_full_unstemmed Robustness of MEK-ERK Dynamics and Origins of Cell-to-Cell Variability in MAPK Signaling
title_short Robustness of MEK-ERK Dynamics and Origins of Cell-to-Cell Variability in MAPK Signaling
title_sort robustness of mek-erk dynamics and origins of cell-to-cell variability in mapk signaling
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4914773/
https://www.ncbi.nlm.nih.gov/pubmed/27264188
http://dx.doi.org/10.1016/j.celrep.2016.05.024
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