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Isolation and characterization of polymorphic microsatellite loci in Selliera radicans (Goodeniaceae)(1)
PREMISE OF THE STUDY: Microsatellite markers were developed for species in the genus Selliera (Goodeniaceae) for future investigations of population genetic structure and interspecific hybridization within the genus. METHODS AND RESULTS: Using 454 pyrosequencing, 15 new markers were developed from m...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Botanical Society of America
2016
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4915921/ https://www.ncbi.nlm.nih.gov/pubmed/27347454 http://dx.doi.org/10.3732/apps.1600012 |
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author | Pilkington, Kay M. Symonds, V. Vaughan |
author_facet | Pilkington, Kay M. Symonds, V. Vaughan |
author_sort | Pilkington, Kay M. |
collection | PubMed |
description | PREMISE OF THE STUDY: Microsatellite markers were developed for species in the genus Selliera (Goodeniaceae) for future investigations of population genetic structure and interspecific hybridization within the genus. METHODS AND RESULTS: Using 454 pyrosequencing, 15 new markers were developed from microsatellite loci isolated from S. radicans. Primers for the new markers amplify di- and trinucleotide repeat loci from the three Selliera species screened. Ten of the new markers are polymorphic in S. radicans and six of those 10 loci were found to be polymorphic within each congener. For the focal species, S. radicans, the average number of alleles per locus is 3.7 (SE = 0.60) and the average observed and expected heterozygosities are 0.23 (SE = 0.07) and 0.47 (SE = 0.08), respectively. CONCLUSIONS: The new markers provide an important resource for future investigations in the genus Selliera for both population genetics and research into hybridization between species. |
format | Online Article Text |
id | pubmed-4915921 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Botanical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-49159212016-06-24 Isolation and characterization of polymorphic microsatellite loci in Selliera radicans (Goodeniaceae)(1) Pilkington, Kay M. Symonds, V. Vaughan Appl Plant Sci Primer Note PREMISE OF THE STUDY: Microsatellite markers were developed for species in the genus Selliera (Goodeniaceae) for future investigations of population genetic structure and interspecific hybridization within the genus. METHODS AND RESULTS: Using 454 pyrosequencing, 15 new markers were developed from microsatellite loci isolated from S. radicans. Primers for the new markers amplify di- and trinucleotide repeat loci from the three Selliera species screened. Ten of the new markers are polymorphic in S. radicans and six of those 10 loci were found to be polymorphic within each congener. For the focal species, S. radicans, the average number of alleles per locus is 3.7 (SE = 0.60) and the average observed and expected heterozygosities are 0.23 (SE = 0.07) and 0.47 (SE = 0.08), respectively. CONCLUSIONS: The new markers provide an important resource for future investigations in the genus Selliera for both population genetics and research into hybridization between species. Botanical Society of America 2016-06-14 /pmc/articles/PMC4915921/ /pubmed/27347454 http://dx.doi.org/10.3732/apps.1600012 Text en © 2016 Pilkington and Symonds. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA). |
spellingShingle | Primer Note Pilkington, Kay M. Symonds, V. Vaughan Isolation and characterization of polymorphic microsatellite loci in Selliera radicans (Goodeniaceae)(1) |
title | Isolation and characterization of polymorphic microsatellite loci in Selliera radicans (Goodeniaceae)(1) |
title_full | Isolation and characterization of polymorphic microsatellite loci in Selliera radicans (Goodeniaceae)(1) |
title_fullStr | Isolation and characterization of polymorphic microsatellite loci in Selliera radicans (Goodeniaceae)(1) |
title_full_unstemmed | Isolation and characterization of polymorphic microsatellite loci in Selliera radicans (Goodeniaceae)(1) |
title_short | Isolation and characterization of polymorphic microsatellite loci in Selliera radicans (Goodeniaceae)(1) |
title_sort | isolation and characterization of polymorphic microsatellite loci in selliera radicans (goodeniaceae)(1) |
topic | Primer Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4915921/ https://www.ncbi.nlm.nih.gov/pubmed/27347454 http://dx.doi.org/10.3732/apps.1600012 |
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