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ZIKV – CDB: A Collaborative Database to Guide Research Linking SncRNAs and ZIKA Virus Disease Symptoms

BACKGROUND: In early 2015, a ZIKA Virus (ZIKV) infection outbreak was recognized in northeast Brazil, where concerns over its possible links with infant microcephaly have been discussed. Providing a causal link between ZIKV infection and birth defects is still a challenge. MicroRNAs (miRNAs) are sma...

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Autores principales: Pylro, Victor Satler, Oliveira, Francislon Silva, Morais, Daniel Kumazawa, Cuadros-Orellana, Sara, Pais, Fabiano Sviatopolk-Mirsky, Medeiros, Julliane Dutra, Geraldo, Juliana Assis, Gilbert, Jack, Volpini, Angela Cristina, Fernandes, Gabriel Rocha
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4917180/
https://www.ncbi.nlm.nih.gov/pubmed/27332714
http://dx.doi.org/10.1371/journal.pntd.0004817
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author Pylro, Victor Satler
Oliveira, Francislon Silva
Morais, Daniel Kumazawa
Cuadros-Orellana, Sara
Pais, Fabiano Sviatopolk-Mirsky
Medeiros, Julliane Dutra
Geraldo, Juliana Assis
Gilbert, Jack
Volpini, Angela Cristina
Fernandes, Gabriel Rocha
author_facet Pylro, Victor Satler
Oliveira, Francislon Silva
Morais, Daniel Kumazawa
Cuadros-Orellana, Sara
Pais, Fabiano Sviatopolk-Mirsky
Medeiros, Julliane Dutra
Geraldo, Juliana Assis
Gilbert, Jack
Volpini, Angela Cristina
Fernandes, Gabriel Rocha
author_sort Pylro, Victor Satler
collection PubMed
description BACKGROUND: In early 2015, a ZIKA Virus (ZIKV) infection outbreak was recognized in northeast Brazil, where concerns over its possible links with infant microcephaly have been discussed. Providing a causal link between ZIKV infection and birth defects is still a challenge. MicroRNAs (miRNAs) are small noncoding RNAs (sncRNAs) that regulate post-transcriptional gene expression by translational repression, and play important roles in viral pathogenesis and brain development. The potential for flavivirus-mediated miRNA signalling dysfunction in brain-tissue development provides a compelling hypothesis to test the perceived link between ZIKV and microcephaly. METHODOLOGY/PRINCIPAL FINDINGS: Here, we applied in silico analyses to provide novel insights to understand how Congenital ZIKA Syndrome symptoms may be related to an imbalance in miRNAs function. Moreover, following World Health Organization (WHO) recommendations, we have assembled a database to help target investigations of the possible relationship between ZIKV symptoms and miRNA-mediated human gene expression. CONCLUSIONS/SIGNIFICANCE: We have computationally predicted both miRNAs encoded by ZIKV able to target genes in the human genome and cellular (human) miRNAs capable of interacting with ZIKV genomes. Our results represent a step forward in the ZIKV studies, providing new insights to support research in this field and identify potential targets for therapy.
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spelling pubmed-49171802016-07-08 ZIKV – CDB: A Collaborative Database to Guide Research Linking SncRNAs and ZIKA Virus Disease Symptoms Pylro, Victor Satler Oliveira, Francislon Silva Morais, Daniel Kumazawa Cuadros-Orellana, Sara Pais, Fabiano Sviatopolk-Mirsky Medeiros, Julliane Dutra Geraldo, Juliana Assis Gilbert, Jack Volpini, Angela Cristina Fernandes, Gabriel Rocha PLoS Negl Trop Dis Research Article BACKGROUND: In early 2015, a ZIKA Virus (ZIKV) infection outbreak was recognized in northeast Brazil, where concerns over its possible links with infant microcephaly have been discussed. Providing a causal link between ZIKV infection and birth defects is still a challenge. MicroRNAs (miRNAs) are small noncoding RNAs (sncRNAs) that regulate post-transcriptional gene expression by translational repression, and play important roles in viral pathogenesis and brain development. The potential for flavivirus-mediated miRNA signalling dysfunction in brain-tissue development provides a compelling hypothesis to test the perceived link between ZIKV and microcephaly. METHODOLOGY/PRINCIPAL FINDINGS: Here, we applied in silico analyses to provide novel insights to understand how Congenital ZIKA Syndrome symptoms may be related to an imbalance in miRNAs function. Moreover, following World Health Organization (WHO) recommendations, we have assembled a database to help target investigations of the possible relationship between ZIKV symptoms and miRNA-mediated human gene expression. CONCLUSIONS/SIGNIFICANCE: We have computationally predicted both miRNAs encoded by ZIKV able to target genes in the human genome and cellular (human) miRNAs capable of interacting with ZIKV genomes. Our results represent a step forward in the ZIKV studies, providing new insights to support research in this field and identify potential targets for therapy. Public Library of Science 2016-06-22 /pmc/articles/PMC4917180/ /pubmed/27332714 http://dx.doi.org/10.1371/journal.pntd.0004817 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication.
spellingShingle Research Article
Pylro, Victor Satler
Oliveira, Francislon Silva
Morais, Daniel Kumazawa
Cuadros-Orellana, Sara
Pais, Fabiano Sviatopolk-Mirsky
Medeiros, Julliane Dutra
Geraldo, Juliana Assis
Gilbert, Jack
Volpini, Angela Cristina
Fernandes, Gabriel Rocha
ZIKV – CDB: A Collaborative Database to Guide Research Linking SncRNAs and ZIKA Virus Disease Symptoms
title ZIKV – CDB: A Collaborative Database to Guide Research Linking SncRNAs and ZIKA Virus Disease Symptoms
title_full ZIKV – CDB: A Collaborative Database to Guide Research Linking SncRNAs and ZIKA Virus Disease Symptoms
title_fullStr ZIKV – CDB: A Collaborative Database to Guide Research Linking SncRNAs and ZIKA Virus Disease Symptoms
title_full_unstemmed ZIKV – CDB: A Collaborative Database to Guide Research Linking SncRNAs and ZIKA Virus Disease Symptoms
title_short ZIKV – CDB: A Collaborative Database to Guide Research Linking SncRNAs and ZIKA Virus Disease Symptoms
title_sort zikv – cdb: a collaborative database to guide research linking sncrnas and zika virus disease symptoms
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4917180/
https://www.ncbi.nlm.nih.gov/pubmed/27332714
http://dx.doi.org/10.1371/journal.pntd.0004817
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