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Molecular descriptor data explain market prices of a large commercial chemical compound library
The relationship between the structure and a property of a chemical compound is an essential concept in chemistry guiding, for example, drug design. Actually, however, we need economic considerations to fully understand the fate of drugs on the market. We are performing here for the first time the e...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4917835/ https://www.ncbi.nlm.nih.gov/pubmed/27334348 http://dx.doi.org/10.1038/srep28521 |
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author | Polanski, Jaroslaw Kucia, Urszula Duszkiewicz, Roksana Kurczyk, Agata Magdziarz, Tomasz Gasteiger, Johann |
author_facet | Polanski, Jaroslaw Kucia, Urszula Duszkiewicz, Roksana Kurczyk, Agata Magdziarz, Tomasz Gasteiger, Johann |
author_sort | Polanski, Jaroslaw |
collection | PubMed |
description | The relationship between the structure and a property of a chemical compound is an essential concept in chemistry guiding, for example, drug design. Actually, however, we need economic considerations to fully understand the fate of drugs on the market. We are performing here for the first time the exploration of quantitative structure-economy relationships (QSER) for a large dataset of a commercial building block library of over 2.2 million chemicals. This investigation provided molecular statistics that shows that on average what we are paying for is the quantity of matter. On the other side, the influence of synthetic availability scores is also revealed. Finally, we are buying substances by looking at the molecular graphs or molecular formulas. Thus, those molecules that have a higher number of atoms look more attractive and are, on average, also more expensive. Our study shows how data binning could be used as an informative method when analyzing big data in chemistry. |
format | Online Article Text |
id | pubmed-4917835 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-49178352016-06-27 Molecular descriptor data explain market prices of a large commercial chemical compound library Polanski, Jaroslaw Kucia, Urszula Duszkiewicz, Roksana Kurczyk, Agata Magdziarz, Tomasz Gasteiger, Johann Sci Rep Article The relationship between the structure and a property of a chemical compound is an essential concept in chemistry guiding, for example, drug design. Actually, however, we need economic considerations to fully understand the fate of drugs on the market. We are performing here for the first time the exploration of quantitative structure-economy relationships (QSER) for a large dataset of a commercial building block library of over 2.2 million chemicals. This investigation provided molecular statistics that shows that on average what we are paying for is the quantity of matter. On the other side, the influence of synthetic availability scores is also revealed. Finally, we are buying substances by looking at the molecular graphs or molecular formulas. Thus, those molecules that have a higher number of atoms look more attractive and are, on average, also more expensive. Our study shows how data binning could be used as an informative method when analyzing big data in chemistry. Nature Publishing Group 2016-06-23 /pmc/articles/PMC4917835/ /pubmed/27334348 http://dx.doi.org/10.1038/srep28521 Text en Copyright © 2016, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Polanski, Jaroslaw Kucia, Urszula Duszkiewicz, Roksana Kurczyk, Agata Magdziarz, Tomasz Gasteiger, Johann Molecular descriptor data explain market prices of a large commercial chemical compound library |
title | Molecular descriptor data explain market prices of a large commercial chemical compound library |
title_full | Molecular descriptor data explain market prices of a large commercial chemical compound library |
title_fullStr | Molecular descriptor data explain market prices of a large commercial chemical compound library |
title_full_unstemmed | Molecular descriptor data explain market prices of a large commercial chemical compound library |
title_short | Molecular descriptor data explain market prices of a large commercial chemical compound library |
title_sort | molecular descriptor data explain market prices of a large commercial chemical compound library |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4917835/ https://www.ncbi.nlm.nih.gov/pubmed/27334348 http://dx.doi.org/10.1038/srep28521 |
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