Cargando…

Feature selection using genetic algorithm for breast cancer diagnosis: experiment on three different datasets

OBJECTIVE(S): This study addresses feature selection for breast cancer diagnosis. The present process uses a wrapper approach using GA-based on feature selection and PS-classifier. The results of experiment show that the proposed model is comparable to the other models on Wisconsin breast cancer dat...

Descripción completa

Detalles Bibliográficos
Autores principales: Aalaei, Shokoufeh, Shahraki, Hadi, Rowhanimanesh, Alireza, Eslami, Saeid
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Mashhad University of Medical Sciences 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4923467/
https://www.ncbi.nlm.nih.gov/pubmed/27403253
_version_ 1782439722709155840
author Aalaei, Shokoufeh
Shahraki, Hadi
Rowhanimanesh, Alireza
Eslami, Saeid
author_facet Aalaei, Shokoufeh
Shahraki, Hadi
Rowhanimanesh, Alireza
Eslami, Saeid
author_sort Aalaei, Shokoufeh
collection PubMed
description OBJECTIVE(S): This study addresses feature selection for breast cancer diagnosis. The present process uses a wrapper approach using GA-based on feature selection and PS-classifier. The results of experiment show that the proposed model is comparable to the other models on Wisconsin breast cancer datasets. MATERIALS AND METHODS: To evaluate effectiveness of proposed feature selection method, we employed three different classifiers artificial neural network (ANN) and PS-classifier and genetic algorithm based classifier (GA-classifier) on Wisconsin breast cancer datasets include Wisconsin breast cancer dataset (WBC), Wisconsin diagnosis breast cancer (WDBC), and Wisconsin prognosis breast cancer (WPBC). RESULTS: For WBC dataset, it is observed that feature selection improved the accuracy of all classifiers expect of ANN and the best accuracy with feature selection achieved by PS-classifier. For WDBC and WPBC, results show feature selection improved accuracy of all three classifiers and the best accuracy with feature selection achieved by ANN. Also specificity and sensitivity improved after feature selection. CONCLUSION: The results show that feature selection can improve accuracy, specificity and sensitivity of classifiers. Result of this study is comparable with the other studies on Wisconsin breast cancer datasets.
format Online
Article
Text
id pubmed-4923467
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Mashhad University of Medical Sciences
record_format MEDLINE/PubMed
spelling pubmed-49234672016-07-11 Feature selection using genetic algorithm for breast cancer diagnosis: experiment on three different datasets Aalaei, Shokoufeh Shahraki, Hadi Rowhanimanesh, Alireza Eslami, Saeid Iran J Basic Med Sci Original Article OBJECTIVE(S): This study addresses feature selection for breast cancer diagnosis. The present process uses a wrapper approach using GA-based on feature selection and PS-classifier. The results of experiment show that the proposed model is comparable to the other models on Wisconsin breast cancer datasets. MATERIALS AND METHODS: To evaluate effectiveness of proposed feature selection method, we employed three different classifiers artificial neural network (ANN) and PS-classifier and genetic algorithm based classifier (GA-classifier) on Wisconsin breast cancer datasets include Wisconsin breast cancer dataset (WBC), Wisconsin diagnosis breast cancer (WDBC), and Wisconsin prognosis breast cancer (WPBC). RESULTS: For WBC dataset, it is observed that feature selection improved the accuracy of all classifiers expect of ANN and the best accuracy with feature selection achieved by PS-classifier. For WDBC and WPBC, results show feature selection improved accuracy of all three classifiers and the best accuracy with feature selection achieved by ANN. Also specificity and sensitivity improved after feature selection. CONCLUSION: The results show that feature selection can improve accuracy, specificity and sensitivity of classifiers. Result of this study is comparable with the other studies on Wisconsin breast cancer datasets. Mashhad University of Medical Sciences 2016-05 /pmc/articles/PMC4923467/ /pubmed/27403253 Text en Copyright: © Iranian Journal of Basic Medical Sciences http://creativecommons.org/licenses/by-nc-sa/3.0 This is an open-access article distributed under the terms of the Creative Commons Attribution-Noncommercial-Share Alike 3.0 Unported, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Aalaei, Shokoufeh
Shahraki, Hadi
Rowhanimanesh, Alireza
Eslami, Saeid
Feature selection using genetic algorithm for breast cancer diagnosis: experiment on three different datasets
title Feature selection using genetic algorithm for breast cancer diagnosis: experiment on three different datasets
title_full Feature selection using genetic algorithm for breast cancer diagnosis: experiment on three different datasets
title_fullStr Feature selection using genetic algorithm for breast cancer diagnosis: experiment on three different datasets
title_full_unstemmed Feature selection using genetic algorithm for breast cancer diagnosis: experiment on three different datasets
title_short Feature selection using genetic algorithm for breast cancer diagnosis: experiment on three different datasets
title_sort feature selection using genetic algorithm for breast cancer diagnosis: experiment on three different datasets
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4923467/
https://www.ncbi.nlm.nih.gov/pubmed/27403253
work_keys_str_mv AT aalaeishokoufeh featureselectionusinggeneticalgorithmforbreastcancerdiagnosisexperimentonthreedifferentdatasets
AT shahrakihadi featureselectionusinggeneticalgorithmforbreastcancerdiagnosisexperimentonthreedifferentdatasets
AT rowhanimaneshalireza featureselectionusinggeneticalgorithmforbreastcancerdiagnosisexperimentonthreedifferentdatasets
AT eslamisaeid featureselectionusinggeneticalgorithmforbreastcancerdiagnosisexperimentonthreedifferentdatasets