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Diversity of Fusarium species isolated from UK forage maize and the population structure of F. graminearum from maize and wheat
Pre-harvest contamination of forage maize by mycotoxin producing Fusarium species was investigated in the UK in 2011 and 2012. A total of 15 Fusarium species were identified from a collection of 1,761 Fusarium isolates recovered from maize stalks and kernels. This study characterized the diversity o...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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PeerJ Inc.
2016
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4924121/ https://www.ncbi.nlm.nih.gov/pubmed/27366645 http://dx.doi.org/10.7717/peerj.2143 |
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author | Basler, Ryan |
author_facet | Basler, Ryan |
author_sort | Basler, Ryan |
collection | PubMed |
description | Pre-harvest contamination of forage maize by mycotoxin producing Fusarium species was investigated in the UK in 2011 and 2012. A total of 15 Fusarium species were identified from a collection of 1,761 Fusarium isolates recovered from maize stalks and kernels. This study characterized the diversity of Fusarium species present in forage maize in the UK. The predominant species detected were F. graminearum (32.9%) and F. culmorum (34.1%). Along with those species; F. avenacem, F. cerealis, F. equiseti, F. langsethiae, F. napiforme, F. oxysporum, F. poae, F. proliferatum, F. scripi, F. solani, F. subglutinans, F. tricinctum and, F. verticillioides were occasionally isolated. The trichothecene genotypes for F. graminearum were determined to be 84.9% deoxynivalenol (DON) and 15.0% nivalenol (NIV) while F. culmorum isolates were determined to have 24.9% DON and 75.1% NIV genotypes. A Bayesian model-based clustering method with nine variable number of tandem repeat markers was used to evaluate the population genetic structure of 277 F. graminearum isolates from the maize and wheat in the UK. There were three genetic clusters detected which were DON in maize, NIV in maize and DON in wheat. There were high admixture probabilities for 14.1% of the isolates in the populations. In conclusion, increased maize production in the UK and the high admixture rates in a significant portion of F. graminearum populations in maize and wheat will contribute to a new pathogen population which will further complicate breeding strategies for tolerance or resistance to this pathogen in both crops. |
format | Online Article Text |
id | pubmed-4924121 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-49241212016-06-30 Diversity of Fusarium species isolated from UK forage maize and the population structure of F. graminearum from maize and wheat Basler, Ryan PeerJ Agricultural Science Pre-harvest contamination of forage maize by mycotoxin producing Fusarium species was investigated in the UK in 2011 and 2012. A total of 15 Fusarium species were identified from a collection of 1,761 Fusarium isolates recovered from maize stalks and kernels. This study characterized the diversity of Fusarium species present in forage maize in the UK. The predominant species detected were F. graminearum (32.9%) and F. culmorum (34.1%). Along with those species; F. avenacem, F. cerealis, F. equiseti, F. langsethiae, F. napiforme, F. oxysporum, F. poae, F. proliferatum, F. scripi, F. solani, F. subglutinans, F. tricinctum and, F. verticillioides were occasionally isolated. The trichothecene genotypes for F. graminearum were determined to be 84.9% deoxynivalenol (DON) and 15.0% nivalenol (NIV) while F. culmorum isolates were determined to have 24.9% DON and 75.1% NIV genotypes. A Bayesian model-based clustering method with nine variable number of tandem repeat markers was used to evaluate the population genetic structure of 277 F. graminearum isolates from the maize and wheat in the UK. There were three genetic clusters detected which were DON in maize, NIV in maize and DON in wheat. There were high admixture probabilities for 14.1% of the isolates in the populations. In conclusion, increased maize production in the UK and the high admixture rates in a significant portion of F. graminearum populations in maize and wheat will contribute to a new pathogen population which will further complicate breeding strategies for tolerance or resistance to this pathogen in both crops. PeerJ Inc. 2016-06-21 /pmc/articles/PMC4924121/ /pubmed/27366645 http://dx.doi.org/10.7717/peerj.2143 Text en ©2016 Basler http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Agricultural Science Basler, Ryan Diversity of Fusarium species isolated from UK forage maize and the population structure of F. graminearum from maize and wheat |
title | Diversity of Fusarium species isolated from UK forage maize and the population structure of F. graminearum from maize and wheat |
title_full | Diversity of Fusarium species isolated from UK forage maize and the population structure of F. graminearum from maize and wheat |
title_fullStr | Diversity of Fusarium species isolated from UK forage maize and the population structure of F. graminearum from maize and wheat |
title_full_unstemmed | Diversity of Fusarium species isolated from UK forage maize and the population structure of F. graminearum from maize and wheat |
title_short | Diversity of Fusarium species isolated from UK forage maize and the population structure of F. graminearum from maize and wheat |
title_sort | diversity of fusarium species isolated from uk forage maize and the population structure of f. graminearum from maize and wheat |
topic | Agricultural Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4924121/ https://www.ncbi.nlm.nih.gov/pubmed/27366645 http://dx.doi.org/10.7717/peerj.2143 |
work_keys_str_mv | AT baslerryan diversityoffusariumspeciesisolatedfromukforagemaizeandthepopulationstructureoffgraminearumfrommaizeandwheat |