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Biosynthetic Functional Gene Analysis of Bis-Indole Metabolites from 25D7, a Clone Derived from a Deep-Sea Sediment Metagenomic Library

This work investigated the metabolites and their biosynthetic functional hydroxylase genes of the deep-sea sediment metagenomic clone 25D7. 5-Bromoindole was added to the 25D7 clone derived Escherichia coli fermentation broth. The new-generated metabolites and their biosynthetic byproducts were loca...

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Autores principales: Yan, Xia, Tang, Xi-Xiang, Qin, Dan, Yi, Zhi-Wei, Fang, Mei-Juan, Wu, Zhen, Qiu, Ying-Kun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4926066/
https://www.ncbi.nlm.nih.gov/pubmed/27258289
http://dx.doi.org/10.3390/md14060107
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author Yan, Xia
Tang, Xi-Xiang
Qin, Dan
Yi, Zhi-Wei
Fang, Mei-Juan
Wu, Zhen
Qiu, Ying-Kun
author_facet Yan, Xia
Tang, Xi-Xiang
Qin, Dan
Yi, Zhi-Wei
Fang, Mei-Juan
Wu, Zhen
Qiu, Ying-Kun
author_sort Yan, Xia
collection PubMed
description This work investigated the metabolites and their biosynthetic functional hydroxylase genes of the deep-sea sediment metagenomic clone 25D7. 5-Bromoindole was added to the 25D7 clone derived Escherichia coli fermentation broth. The new-generated metabolites and their biosynthetic byproducts were located through LC-MS, in which the isotope peaks of brominated products emerged. Two new brominated bis-indole metabolites, 5-bromometagenediindole B (1), and 5-bromometagenediindole C (2) were separated under the guidance of LC-MS. Their structures were elucidated on the basis of 1D and 2D NMR spectra (COSY, HSQC, and HMBC). The biosynthetic functional genes of the two new compounds were revealed through LC-MS and transposon mutagenesis analysis. 5-Bromometagenediindole B (1) also demonstrated moderately cytotoxic activity against MCF7, B16, CNE2, Bel7402, and HT1080 tumor cell lines in vitro.
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spelling pubmed-49260662016-07-06 Biosynthetic Functional Gene Analysis of Bis-Indole Metabolites from 25D7, a Clone Derived from a Deep-Sea Sediment Metagenomic Library Yan, Xia Tang, Xi-Xiang Qin, Dan Yi, Zhi-Wei Fang, Mei-Juan Wu, Zhen Qiu, Ying-Kun Mar Drugs Article This work investigated the metabolites and their biosynthetic functional hydroxylase genes of the deep-sea sediment metagenomic clone 25D7. 5-Bromoindole was added to the 25D7 clone derived Escherichia coli fermentation broth. The new-generated metabolites and their biosynthetic byproducts were located through LC-MS, in which the isotope peaks of brominated products emerged. Two new brominated bis-indole metabolites, 5-bromometagenediindole B (1), and 5-bromometagenediindole C (2) were separated under the guidance of LC-MS. Their structures were elucidated on the basis of 1D and 2D NMR spectra (COSY, HSQC, and HMBC). The biosynthetic functional genes of the two new compounds were revealed through LC-MS and transposon mutagenesis analysis. 5-Bromometagenediindole B (1) also demonstrated moderately cytotoxic activity against MCF7, B16, CNE2, Bel7402, and HT1080 tumor cell lines in vitro. MDPI 2016-06-01 /pmc/articles/PMC4926066/ /pubmed/27258289 http://dx.doi.org/10.3390/md14060107 Text en © 2016 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC-BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Yan, Xia
Tang, Xi-Xiang
Qin, Dan
Yi, Zhi-Wei
Fang, Mei-Juan
Wu, Zhen
Qiu, Ying-Kun
Biosynthetic Functional Gene Analysis of Bis-Indole Metabolites from 25D7, a Clone Derived from a Deep-Sea Sediment Metagenomic Library
title Biosynthetic Functional Gene Analysis of Bis-Indole Metabolites from 25D7, a Clone Derived from a Deep-Sea Sediment Metagenomic Library
title_full Biosynthetic Functional Gene Analysis of Bis-Indole Metabolites from 25D7, a Clone Derived from a Deep-Sea Sediment Metagenomic Library
title_fullStr Biosynthetic Functional Gene Analysis of Bis-Indole Metabolites from 25D7, a Clone Derived from a Deep-Sea Sediment Metagenomic Library
title_full_unstemmed Biosynthetic Functional Gene Analysis of Bis-Indole Metabolites from 25D7, a Clone Derived from a Deep-Sea Sediment Metagenomic Library
title_short Biosynthetic Functional Gene Analysis of Bis-Indole Metabolites from 25D7, a Clone Derived from a Deep-Sea Sediment Metagenomic Library
title_sort biosynthetic functional gene analysis of bis-indole metabolites from 25d7, a clone derived from a deep-sea sediment metagenomic library
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4926066/
https://www.ncbi.nlm.nih.gov/pubmed/27258289
http://dx.doi.org/10.3390/md14060107
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