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Transcriptome and Difference Analysis of Fenpropathrin Resistant Predatory Mite, Neoseiulus barkeri (Hughes)

Several fenpropathrin-resistant predatory mites have been reported. However, the molecular mechanism of the resistance remains unknown. In the present study, the Neoseiulus barkeri (N. barkeri) transcriptome was generated using the Illumina sequencing platform, 34,211 unigenes were obtained, and 15,...

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Autores principales: Cong, Lin, Chen, Fei, Yu, Shijiang, Ding, Lili, Yang, Juan, Luo, Ren, Tian, Huixia, Li, Hongjun, Liu, Haoqiang, Ran, Chun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4926325/
https://www.ncbi.nlm.nih.gov/pubmed/27240349
http://dx.doi.org/10.3390/ijms17060704
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author Cong, Lin
Chen, Fei
Yu, Shijiang
Ding, Lili
Yang, Juan
Luo, Ren
Tian, Huixia
Li, Hongjun
Liu, Haoqiang
Ran, Chun
author_facet Cong, Lin
Chen, Fei
Yu, Shijiang
Ding, Lili
Yang, Juan
Luo, Ren
Tian, Huixia
Li, Hongjun
Liu, Haoqiang
Ran, Chun
author_sort Cong, Lin
collection PubMed
description Several fenpropathrin-resistant predatory mites have been reported. However, the molecular mechanism of the resistance remains unknown. In the present study, the Neoseiulus barkeri (N. barkeri) transcriptome was generated using the Illumina sequencing platform, 34,211 unigenes were obtained, and 15,987 were manually annotated. After manual annotation, attentions were attracted to resistance-related genes, such as voltage-gated sodium channel (VGSC), cytochrome P450s (P450s), and glutathione S-transferases (GSTs). A polymorphism analysis detected two point mutations (E1233G and S1282G) in the linker region between VGSC domain II and III. In addition, 43 putative P450 genes and 10 putative GST genes were identified from the transcriptome. Among them, two P450 genes, NbCYP4EV2 and NbCYP4EZ1, and four GST genes, NbGSTd01, NbGSTd02, NbGSTd03 and NbGSTm03, were remarkably overexpressed 3.64–46.69-fold in the fenpropathrin resistant strain compared to that in the susceptible strain. These results suggest that fenpropathrin resistance in N. barkeri is a complex biological process involving many genetic changes and provide new insight into the N. barkeri resistance mechanism.
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spelling pubmed-49263252016-07-06 Transcriptome and Difference Analysis of Fenpropathrin Resistant Predatory Mite, Neoseiulus barkeri (Hughes) Cong, Lin Chen, Fei Yu, Shijiang Ding, Lili Yang, Juan Luo, Ren Tian, Huixia Li, Hongjun Liu, Haoqiang Ran, Chun Int J Mol Sci Article Several fenpropathrin-resistant predatory mites have been reported. However, the molecular mechanism of the resistance remains unknown. In the present study, the Neoseiulus barkeri (N. barkeri) transcriptome was generated using the Illumina sequencing platform, 34,211 unigenes were obtained, and 15,987 were manually annotated. After manual annotation, attentions were attracted to resistance-related genes, such as voltage-gated sodium channel (VGSC), cytochrome P450s (P450s), and glutathione S-transferases (GSTs). A polymorphism analysis detected two point mutations (E1233G and S1282G) in the linker region between VGSC domain II and III. In addition, 43 putative P450 genes and 10 putative GST genes were identified from the transcriptome. Among them, two P450 genes, NbCYP4EV2 and NbCYP4EZ1, and four GST genes, NbGSTd01, NbGSTd02, NbGSTd03 and NbGSTm03, were remarkably overexpressed 3.64–46.69-fold in the fenpropathrin resistant strain compared to that in the susceptible strain. These results suggest that fenpropathrin resistance in N. barkeri is a complex biological process involving many genetic changes and provide new insight into the N. barkeri resistance mechanism. MDPI 2016-05-27 /pmc/articles/PMC4926325/ /pubmed/27240349 http://dx.doi.org/10.3390/ijms17060704 Text en © 2016 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC-BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Cong, Lin
Chen, Fei
Yu, Shijiang
Ding, Lili
Yang, Juan
Luo, Ren
Tian, Huixia
Li, Hongjun
Liu, Haoqiang
Ran, Chun
Transcriptome and Difference Analysis of Fenpropathrin Resistant Predatory Mite, Neoseiulus barkeri (Hughes)
title Transcriptome and Difference Analysis of Fenpropathrin Resistant Predatory Mite, Neoseiulus barkeri (Hughes)
title_full Transcriptome and Difference Analysis of Fenpropathrin Resistant Predatory Mite, Neoseiulus barkeri (Hughes)
title_fullStr Transcriptome and Difference Analysis of Fenpropathrin Resistant Predatory Mite, Neoseiulus barkeri (Hughes)
title_full_unstemmed Transcriptome and Difference Analysis of Fenpropathrin Resistant Predatory Mite, Neoseiulus barkeri (Hughes)
title_short Transcriptome and Difference Analysis of Fenpropathrin Resistant Predatory Mite, Neoseiulus barkeri (Hughes)
title_sort transcriptome and difference analysis of fenpropathrin resistant predatory mite, neoseiulus barkeri (hughes)
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4926325/
https://www.ncbi.nlm.nih.gov/pubmed/27240349
http://dx.doi.org/10.3390/ijms17060704
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