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Temporal sparsity exploiting nonlocal regularization for 4D computed tomography reconstruction
X-ray imaging applications in medical and material sciences are frequently limited by the number of tomographic projections collected. The inversion of the limited projection data is an ill-posed problem and needs regularization. Traditional spatial regularization is not well adapted to the dynamic...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
IOS Press
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4929339/ https://www.ncbi.nlm.nih.gov/pubmed/27002902 http://dx.doi.org/10.3233/XST-160546 |
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author | Kazantsev, Daniil Guo, Enyu Kaestner, Anders Lionheart, William R. B. Bent, Julian Withers, Philip J. Lee, Peter D. |
author_facet | Kazantsev, Daniil Guo, Enyu Kaestner, Anders Lionheart, William R. B. Bent, Julian Withers, Philip J. Lee, Peter D. |
author_sort | Kazantsev, Daniil |
collection | PubMed |
description | X-ray imaging applications in medical and material sciences are frequently limited by the number of tomographic projections collected. The inversion of the limited projection data is an ill-posed problem and needs regularization. Traditional spatial regularization is not well adapted to the dynamic nature of time-lapse tomography since it discards the redundancy of the temporal information. In this paper, we propose a novel iterative reconstruction algorithm with a nonlocal regularization term to account for time-evolving datasets. The aim of the proposed nonlocal penalty is to collect the maximum relevant information in the spatial and temporal domains. With the proposed sparsity seeking approach in the temporal space, the computational complexity of the classical nonlocal regularizer is substantially reduced (at least by one order of magnitude). The presented reconstruction method can be directly applied to various big data 4D (x, y, z+time) tomographic experiments in many fields. We apply the proposed technique to modelled data and to real dynamic X-ray microtomography (XMT) data of high resolution. Compared to the classical spatio-temporal nonlocal regularization approach, the proposed method delivers reconstructed images of improved resolution and higher contrast while remaining significantly less computationally demanding. |
format | Online Article Text |
id | pubmed-4929339 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | IOS Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-49293392016-07-06 Temporal sparsity exploiting nonlocal regularization for 4D computed tomography reconstruction Kazantsev, Daniil Guo, Enyu Kaestner, Anders Lionheart, William R. B. Bent, Julian Withers, Philip J. Lee, Peter D. J Xray Sci Technol Research Article X-ray imaging applications in medical and material sciences are frequently limited by the number of tomographic projections collected. The inversion of the limited projection data is an ill-posed problem and needs regularization. Traditional spatial regularization is not well adapted to the dynamic nature of time-lapse tomography since it discards the redundancy of the temporal information. In this paper, we propose a novel iterative reconstruction algorithm with a nonlocal regularization term to account for time-evolving datasets. The aim of the proposed nonlocal penalty is to collect the maximum relevant information in the spatial and temporal domains. With the proposed sparsity seeking approach in the temporal space, the computational complexity of the classical nonlocal regularizer is substantially reduced (at least by one order of magnitude). The presented reconstruction method can be directly applied to various big data 4D (x, y, z+time) tomographic experiments in many fields. We apply the proposed technique to modelled data and to real dynamic X-ray microtomography (XMT) data of high resolution. Compared to the classical spatio-temporal nonlocal regularization approach, the proposed method delivers reconstructed images of improved resolution and higher contrast while remaining significantly less computationally demanding. IOS Press 2016-03-25 /pmc/articles/PMC4929339/ /pubmed/27002902 http://dx.doi.org/10.3233/XST-160546 Text en IOS Press and the authors. All rights reserved https://creativecommons.org/licenses/by-nc/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Non-Commercial (CC BY-NC 4.0) License (https://creativecommons.org/licenses/by-nc/4.0/) , which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Kazantsev, Daniil Guo, Enyu Kaestner, Anders Lionheart, William R. B. Bent, Julian Withers, Philip J. Lee, Peter D. Temporal sparsity exploiting nonlocal regularization for 4D computed tomography reconstruction |
title | Temporal sparsity exploiting nonlocal regularization for 4D computed tomography reconstruction |
title_full | Temporal sparsity exploiting nonlocal regularization for 4D computed tomography reconstruction |
title_fullStr | Temporal sparsity exploiting nonlocal regularization for 4D computed tomography reconstruction |
title_full_unstemmed | Temporal sparsity exploiting nonlocal regularization for 4D computed tomography reconstruction |
title_short | Temporal sparsity exploiting nonlocal regularization for 4D computed tomography reconstruction |
title_sort | temporal sparsity exploiting nonlocal regularization for 4d computed tomography reconstruction |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4929339/ https://www.ncbi.nlm.nih.gov/pubmed/27002902 http://dx.doi.org/10.3233/XST-160546 |
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