Cargando…

Temporal sparsity exploiting nonlocal regularization for 4D computed tomography reconstruction

X-ray imaging applications in medical and material sciences are frequently limited by the number of tomographic projections collected. The inversion of the limited projection data is an ill-posed problem and needs regularization. Traditional spatial regularization is not well adapted to the dynamic...

Descripción completa

Detalles Bibliográficos
Autores principales: Kazantsev, Daniil, Guo, Enyu, Kaestner, Anders, Lionheart, William R. B., Bent, Julian, Withers, Philip J., Lee, Peter D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: IOS Press 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4929339/
https://www.ncbi.nlm.nih.gov/pubmed/27002902
http://dx.doi.org/10.3233/XST-160546
_version_ 1782440589880459264
author Kazantsev, Daniil
Guo, Enyu
Kaestner, Anders
Lionheart, William R. B.
Bent, Julian
Withers, Philip J.
Lee, Peter D.
author_facet Kazantsev, Daniil
Guo, Enyu
Kaestner, Anders
Lionheart, William R. B.
Bent, Julian
Withers, Philip J.
Lee, Peter D.
author_sort Kazantsev, Daniil
collection PubMed
description X-ray imaging applications in medical and material sciences are frequently limited by the number of tomographic projections collected. The inversion of the limited projection data is an ill-posed problem and needs regularization. Traditional spatial regularization is not well adapted to the dynamic nature of time-lapse tomography since it discards the redundancy of the temporal information. In this paper, we propose a novel iterative reconstruction algorithm with a nonlocal regularization term to account for time-evolving datasets. The aim of the proposed nonlocal penalty is to collect the maximum relevant information in the spatial and temporal domains. With the proposed sparsity seeking approach in the temporal space, the computational complexity of the classical nonlocal regularizer is substantially reduced (at least by one order of magnitude). The presented reconstruction method can be directly applied to various big data 4D (x, y, z+time) tomographic experiments in many fields. We apply the proposed technique to modelled data and to real dynamic X-ray microtomography (XMT) data of high resolution. Compared to the classical spatio-temporal nonlocal regularization approach, the proposed method delivers reconstructed images of improved resolution and higher contrast while remaining significantly less computationally demanding.
format Online
Article
Text
id pubmed-4929339
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher IOS Press
record_format MEDLINE/PubMed
spelling pubmed-49293392016-07-06 Temporal sparsity exploiting nonlocal regularization for 4D computed tomography reconstruction Kazantsev, Daniil Guo, Enyu Kaestner, Anders Lionheart, William R. B. Bent, Julian Withers, Philip J. Lee, Peter D. J Xray Sci Technol Research Article X-ray imaging applications in medical and material sciences are frequently limited by the number of tomographic projections collected. The inversion of the limited projection data is an ill-posed problem and needs regularization. Traditional spatial regularization is not well adapted to the dynamic nature of time-lapse tomography since it discards the redundancy of the temporal information. In this paper, we propose a novel iterative reconstruction algorithm with a nonlocal regularization term to account for time-evolving datasets. The aim of the proposed nonlocal penalty is to collect the maximum relevant information in the spatial and temporal domains. With the proposed sparsity seeking approach in the temporal space, the computational complexity of the classical nonlocal regularizer is substantially reduced (at least by one order of magnitude). The presented reconstruction method can be directly applied to various big data 4D (x, y, z+time) tomographic experiments in many fields. We apply the proposed technique to modelled data and to real dynamic X-ray microtomography (XMT) data of high resolution. Compared to the classical spatio-temporal nonlocal regularization approach, the proposed method delivers reconstructed images of improved resolution and higher contrast while remaining significantly less computationally demanding. IOS Press 2016-03-25 /pmc/articles/PMC4929339/ /pubmed/27002902 http://dx.doi.org/10.3233/XST-160546 Text en IOS Press and the authors. All rights reserved https://creativecommons.org/licenses/by-nc/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Non-Commercial (CC BY-NC 4.0) License (https://creativecommons.org/licenses/by-nc/4.0/) , which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Kazantsev, Daniil
Guo, Enyu
Kaestner, Anders
Lionheart, William R. B.
Bent, Julian
Withers, Philip J.
Lee, Peter D.
Temporal sparsity exploiting nonlocal regularization for 4D computed tomography reconstruction
title Temporal sparsity exploiting nonlocal regularization for 4D computed tomography reconstruction
title_full Temporal sparsity exploiting nonlocal regularization for 4D computed tomography reconstruction
title_fullStr Temporal sparsity exploiting nonlocal regularization for 4D computed tomography reconstruction
title_full_unstemmed Temporal sparsity exploiting nonlocal regularization for 4D computed tomography reconstruction
title_short Temporal sparsity exploiting nonlocal regularization for 4D computed tomography reconstruction
title_sort temporal sparsity exploiting nonlocal regularization for 4d computed tomography reconstruction
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4929339/
https://www.ncbi.nlm.nih.gov/pubmed/27002902
http://dx.doi.org/10.3233/XST-160546
work_keys_str_mv AT kazantsevdaniil temporalsparsityexploitingnonlocalregularizationfor4dcomputedtomographyreconstruction
AT guoenyu temporalsparsityexploitingnonlocalregularizationfor4dcomputedtomographyreconstruction
AT kaestneranders temporalsparsityexploitingnonlocalregularizationfor4dcomputedtomographyreconstruction
AT lionheartwilliamrb temporalsparsityexploitingnonlocalregularizationfor4dcomputedtomographyreconstruction
AT bentjulian temporalsparsityexploitingnonlocalregularizationfor4dcomputedtomographyreconstruction
AT withersphilipj temporalsparsityexploitingnonlocalregularizationfor4dcomputedtomographyreconstruction
AT leepeterd temporalsparsityexploitingnonlocalregularizationfor4dcomputedtomographyreconstruction