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A Multi-Step miRNA-mRNA Regulatory Network Construction Approach Identifies Gene Signatures Associated with Endometrioid Endometrial Carcinoma

We aimed to identify endometrioid endometrial carcinoma (EEC)-related gene signatures using a multi-step miRNA-mRNA regulatory network construction approach. Pathway analysis showed that 61 genes were enriched on many carcinoma-related pathways. Among the 14 highest scoring gene signatures, six gene...

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Autores principales: Xiong, Hanzhen, Li, Qiulian, Chen, Ruichao, Liu, Shaoyan, Lin, Qiongyan, Xiong, Zhongtang, Jiang, Qingping, Guo, Linlang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4929425/
https://www.ncbi.nlm.nih.gov/pubmed/27271671
http://dx.doi.org/10.3390/genes7060026
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author Xiong, Hanzhen
Li, Qiulian
Chen, Ruichao
Liu, Shaoyan
Lin, Qiongyan
Xiong, Zhongtang
Jiang, Qingping
Guo, Linlang
author_facet Xiong, Hanzhen
Li, Qiulian
Chen, Ruichao
Liu, Shaoyan
Lin, Qiongyan
Xiong, Zhongtang
Jiang, Qingping
Guo, Linlang
author_sort Xiong, Hanzhen
collection PubMed
description We aimed to identify endometrioid endometrial carcinoma (EEC)-related gene signatures using a multi-step miRNA-mRNA regulatory network construction approach. Pathway analysis showed that 61 genes were enriched on many carcinoma-related pathways. Among the 14 highest scoring gene signatures, six genes had been previously shown to be endometrial carcinoma. By qRT-PCR and next generation sequencing, we found that a gene signature (CPEB1) was significantly down-regulated in EEC tissues, which may be caused by hsa-miR-183-5p up-regulation. In addition, our literature surveys suggested that CPEB1 may play an important role in EEC pathogenesis by regulating the EMT/p53 pathway. The miRNA-mRNA network is worthy of further investigation with respect to the regulatory mechanisms of miRNAs in EEC. CPEB1 appeared to be a tumor suppressor in EEC. Our results provided valuable guidance for the functional study at the cellular level, as well as the EEC mouse models.
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spelling pubmed-49294252016-07-07 A Multi-Step miRNA-mRNA Regulatory Network Construction Approach Identifies Gene Signatures Associated with Endometrioid Endometrial Carcinoma Xiong, Hanzhen Li, Qiulian Chen, Ruichao Liu, Shaoyan Lin, Qiongyan Xiong, Zhongtang Jiang, Qingping Guo, Linlang Genes (Basel) Article We aimed to identify endometrioid endometrial carcinoma (EEC)-related gene signatures using a multi-step miRNA-mRNA regulatory network construction approach. Pathway analysis showed that 61 genes were enriched on many carcinoma-related pathways. Among the 14 highest scoring gene signatures, six genes had been previously shown to be endometrial carcinoma. By qRT-PCR and next generation sequencing, we found that a gene signature (CPEB1) was significantly down-regulated in EEC tissues, which may be caused by hsa-miR-183-5p up-regulation. In addition, our literature surveys suggested that CPEB1 may play an important role in EEC pathogenesis by regulating the EMT/p53 pathway. The miRNA-mRNA network is worthy of further investigation with respect to the regulatory mechanisms of miRNAs in EEC. CPEB1 appeared to be a tumor suppressor in EEC. Our results provided valuable guidance for the functional study at the cellular level, as well as the EEC mouse models. MDPI 2016-06-02 /pmc/articles/PMC4929425/ /pubmed/27271671 http://dx.doi.org/10.3390/genes7060026 Text en © 2016 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC-BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Xiong, Hanzhen
Li, Qiulian
Chen, Ruichao
Liu, Shaoyan
Lin, Qiongyan
Xiong, Zhongtang
Jiang, Qingping
Guo, Linlang
A Multi-Step miRNA-mRNA Regulatory Network Construction Approach Identifies Gene Signatures Associated with Endometrioid Endometrial Carcinoma
title A Multi-Step miRNA-mRNA Regulatory Network Construction Approach Identifies Gene Signatures Associated with Endometrioid Endometrial Carcinoma
title_full A Multi-Step miRNA-mRNA Regulatory Network Construction Approach Identifies Gene Signatures Associated with Endometrioid Endometrial Carcinoma
title_fullStr A Multi-Step miRNA-mRNA Regulatory Network Construction Approach Identifies Gene Signatures Associated with Endometrioid Endometrial Carcinoma
title_full_unstemmed A Multi-Step miRNA-mRNA Regulatory Network Construction Approach Identifies Gene Signatures Associated with Endometrioid Endometrial Carcinoma
title_short A Multi-Step miRNA-mRNA Regulatory Network Construction Approach Identifies Gene Signatures Associated with Endometrioid Endometrial Carcinoma
title_sort multi-step mirna-mrna regulatory network construction approach identifies gene signatures associated with endometrioid endometrial carcinoma
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4929425/
https://www.ncbi.nlm.nih.gov/pubmed/27271671
http://dx.doi.org/10.3390/genes7060026
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