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Identification of lung‐specific genes by meta‐analysis of multiple tissue RNA‐seq data

Lung‐specific genes play critically important roles in lung development, lung physiology, and pathogenesis of lung‐associated diseases. We performed a meta‐analysis of multiple tissue RNA‐seq data to identify lung‐specific genes in order to better investigate their lung‐specific functions and pathol...

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Detalles Bibliográficos
Autores principales: Xiong, Min, Heruth, Daniel P., Zhang, Li Qin, Ye, Shui Qing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4932457/
https://www.ncbi.nlm.nih.gov/pubmed/27398317
http://dx.doi.org/10.1002/2211-5463.12089
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author Xiong, Min
Heruth, Daniel P.
Zhang, Li Qin
Ye, Shui Qing
author_facet Xiong, Min
Heruth, Daniel P.
Zhang, Li Qin
Ye, Shui Qing
author_sort Xiong, Min
collection PubMed
description Lung‐specific genes play critically important roles in lung development, lung physiology, and pathogenesis of lung‐associated diseases. We performed a meta‐analysis of multiple tissue RNA‐seq data to identify lung‐specific genes in order to better investigate their lung‐specific functions and pathological roles. We identified 83 lung‐specific genes consisting of 62 protein‐coding genes, five pseudogenes and 16 noncoding RNA genes. About 49.4% of lung‐specific genes were implicated in the pathogenesis of lung diseases and 21.7% were involved with lung development. The identification of genes with enriched expression in the lung will facilitate the elucidation of lung‐specific functions and their roles in disease pathogenesis.
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spelling pubmed-49324572016-07-08 Identification of lung‐specific genes by meta‐analysis of multiple tissue RNA‐seq data Xiong, Min Heruth, Daniel P. Zhang, Li Qin Ye, Shui Qing FEBS Open Bio Research Articles Lung‐specific genes play critically important roles in lung development, lung physiology, and pathogenesis of lung‐associated diseases. We performed a meta‐analysis of multiple tissue RNA‐seq data to identify lung‐specific genes in order to better investigate their lung‐specific functions and pathological roles. We identified 83 lung‐specific genes consisting of 62 protein‐coding genes, five pseudogenes and 16 noncoding RNA genes. About 49.4% of lung‐specific genes were implicated in the pathogenesis of lung diseases and 21.7% were involved with lung development. The identification of genes with enriched expression in the lung will facilitate the elucidation of lung‐specific functions and their roles in disease pathogenesis. John Wiley and Sons Inc. 2016-06-16 /pmc/articles/PMC4932457/ /pubmed/27398317 http://dx.doi.org/10.1002/2211-5463.12089 Text en © 2016 The Authors. Published by FEBS Press and John Wiley & Sons Ltd. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Xiong, Min
Heruth, Daniel P.
Zhang, Li Qin
Ye, Shui Qing
Identification of lung‐specific genes by meta‐analysis of multiple tissue RNA‐seq data
title Identification of lung‐specific genes by meta‐analysis of multiple tissue RNA‐seq data
title_full Identification of lung‐specific genes by meta‐analysis of multiple tissue RNA‐seq data
title_fullStr Identification of lung‐specific genes by meta‐analysis of multiple tissue RNA‐seq data
title_full_unstemmed Identification of lung‐specific genes by meta‐analysis of multiple tissue RNA‐seq data
title_short Identification of lung‐specific genes by meta‐analysis of multiple tissue RNA‐seq data
title_sort identification of lung‐specific genes by meta‐analysis of multiple tissue rna‐seq data
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4932457/
https://www.ncbi.nlm.nih.gov/pubmed/27398317
http://dx.doi.org/10.1002/2211-5463.12089
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