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Inverse Temperature Dependence of Nuclear Quantum Effects in DNA Base Pairs
[Image: see text] Despite the inherently quantum mechanical nature of hydrogen bonding, it is unclear how nuclear quantum effects (NQEs) alter the strengths of hydrogen bonds. With this in mind, we use ab initio path integral molecular dynamics to determine the absolute contribution of NQEs to the b...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical
Society
2016
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4933496/ https://www.ncbi.nlm.nih.gov/pubmed/27195654 http://dx.doi.org/10.1021/acs.jpclett.6b00777 |
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author | Fang, Wei Chen, Ji Rossi, Mariana Feng, Yexin Li, Xin-Zheng Michaelides, Angelos |
author_facet | Fang, Wei Chen, Ji Rossi, Mariana Feng, Yexin Li, Xin-Zheng Michaelides, Angelos |
author_sort | Fang, Wei |
collection | PubMed |
description | [Image: see text] Despite the inherently quantum mechanical nature of hydrogen bonding, it is unclear how nuclear quantum effects (NQEs) alter the strengths of hydrogen bonds. With this in mind, we use ab initio path integral molecular dynamics to determine the absolute contribution of NQEs to the binding in DNA base pair complexes, arguably the most important hydrogen-bonded systems of all. We find that depending on the temperature, NQEs can either strengthen or weaken the binding within the hydrogen-bonded complexes. As a somewhat counterintuitive consequence, NQEs can have a smaller impact on hydrogen bond strengths at cryogenic temperatures than at room temperature. We rationalize this in terms of a competition of NQEs between low-frequency and high-frequency vibrational modes. Extending this idea, we also propose a simple model to predict the temperature dependence of NQEs on hydrogen bond strengths in general. |
format | Online Article Text |
id | pubmed-4933496 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | American Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-49334962016-07-07 Inverse Temperature Dependence of Nuclear Quantum Effects in DNA Base Pairs Fang, Wei Chen, Ji Rossi, Mariana Feng, Yexin Li, Xin-Zheng Michaelides, Angelos J Phys Chem Lett [Image: see text] Despite the inherently quantum mechanical nature of hydrogen bonding, it is unclear how nuclear quantum effects (NQEs) alter the strengths of hydrogen bonds. With this in mind, we use ab initio path integral molecular dynamics to determine the absolute contribution of NQEs to the binding in DNA base pair complexes, arguably the most important hydrogen-bonded systems of all. We find that depending on the temperature, NQEs can either strengthen or weaken the binding within the hydrogen-bonded complexes. As a somewhat counterintuitive consequence, NQEs can have a smaller impact on hydrogen bond strengths at cryogenic temperatures than at room temperature. We rationalize this in terms of a competition of NQEs between low-frequency and high-frequency vibrational modes. Extending this idea, we also propose a simple model to predict the temperature dependence of NQEs on hydrogen bond strengths in general. American Chemical Society 2016-05-19 2016-06-02 /pmc/articles/PMC4933496/ /pubmed/27195654 http://dx.doi.org/10.1021/acs.jpclett.6b00777 Text en Copyright © 2016 American Chemical Society This is an open access article published under an ACS AuthorChoice License (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) , which permits copying and redistribution of the article or any adaptations for non-commercial purposes. |
spellingShingle | Fang, Wei Chen, Ji Rossi, Mariana Feng, Yexin Li, Xin-Zheng Michaelides, Angelos Inverse Temperature Dependence of Nuclear Quantum Effects in DNA Base Pairs |
title | Inverse Temperature Dependence of Nuclear Quantum
Effects in DNA Base Pairs |
title_full | Inverse Temperature Dependence of Nuclear Quantum
Effects in DNA Base Pairs |
title_fullStr | Inverse Temperature Dependence of Nuclear Quantum
Effects in DNA Base Pairs |
title_full_unstemmed | Inverse Temperature Dependence of Nuclear Quantum
Effects in DNA Base Pairs |
title_short | Inverse Temperature Dependence of Nuclear Quantum
Effects in DNA Base Pairs |
title_sort | inverse temperature dependence of nuclear quantum
effects in dna base pairs |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4933496/ https://www.ncbi.nlm.nih.gov/pubmed/27195654 http://dx.doi.org/10.1021/acs.jpclett.6b00777 |
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