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SNPsplit: Allele-specific splitting of alignments between genomes with known SNP genotypes

Sequencing reads overlapping polymorphic sites in diploid mammalian genomes may be assigned to one allele or the other. This holds the potential to detect gene expression, chromatin modifications, DNA methylation or nuclear interactions in an allele-specific fashion. SNPsplit is an allele-specific a...

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Detalles Bibliográficos
Autores principales: Krueger, Felix, Andrews, Simon R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: F1000Research 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4934512/
https://www.ncbi.nlm.nih.gov/pubmed/27429743
http://dx.doi.org/10.12688/f1000research.9037.2

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