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Radiomic feature clusters and Prognostic Signatures specific for Lung and Head & Neck cancer
Radiomics provides a comprehensive quantification of tumor phenotypes by extracting and mining large number of quantitative image features. To reduce the redundancy and compare the prognostic characteristics of radiomic features across cancer types, we investigated cancer-specific radiomic feature c...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4937496/ https://www.ncbi.nlm.nih.gov/pubmed/26251068 http://dx.doi.org/10.1038/srep11044 |
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author | Parmar, Chintan Leijenaar, Ralph T. H. Grossmann, Patrick Rios Velazquez, Emmanuel Bussink, Johan Rietveld, Derek Rietbergen, Michelle M. Haibe-Kains, Benjamin Lambin, Philippe Aerts, Hugo J.W.L. |
author_facet | Parmar, Chintan Leijenaar, Ralph T. H. Grossmann, Patrick Rios Velazquez, Emmanuel Bussink, Johan Rietveld, Derek Rietbergen, Michelle M. Haibe-Kains, Benjamin Lambin, Philippe Aerts, Hugo J.W.L. |
author_sort | Parmar, Chintan |
collection | PubMed |
description | Radiomics provides a comprehensive quantification of tumor phenotypes by extracting and mining large number of quantitative image features. To reduce the redundancy and compare the prognostic characteristics of radiomic features across cancer types, we investigated cancer-specific radiomic feature clusters in four independent Lung and Head & Neck (H∓N) cancer cohorts (in total 878 patients). Radiomic features were extracted from the pre-treatment computed tomography (CT) images. Consensus clustering resulted in eleven and thirteen stable radiomic feature clusters for Lung and H & N cancer, respectively. These clusters were validated in independent external validation cohorts using rand statistic (Lung RS = 0.92, p < 0.001, H & N RS = 0.92, p < 0.001). Our analysis indicated both common as well as cancer-specific clustering and clinical associations of radiomic features. Strongest associations with clinical parameters: Prognosis Lung CI = 0.60 ± 0.01, Prognosis H & N CI = 0.68 ± 0.01; Lung histology AUC = 0.56 ± 0.03, Lung stage AUC = 0.61 ± 0.01, H & N HPV AUC = 0.58 ± 0.03, H & N stage AUC = 0.77 ± 0.02. Full utilization of these cancer-specific characteristics of image features may further improve radiomic biomarkers, providing a non-invasive way of quantifying and monitoring tumor phenotypic characteristics in clinical practice. |
format | Online Article Text |
id | pubmed-4937496 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-49374962016-07-18 Radiomic feature clusters and Prognostic Signatures specific for Lung and Head & Neck cancer Parmar, Chintan Leijenaar, Ralph T. H. Grossmann, Patrick Rios Velazquez, Emmanuel Bussink, Johan Rietveld, Derek Rietbergen, Michelle M. Haibe-Kains, Benjamin Lambin, Philippe Aerts, Hugo J.W.L. Sci Rep Article Radiomics provides a comprehensive quantification of tumor phenotypes by extracting and mining large number of quantitative image features. To reduce the redundancy and compare the prognostic characteristics of radiomic features across cancer types, we investigated cancer-specific radiomic feature clusters in four independent Lung and Head & Neck (H∓N) cancer cohorts (in total 878 patients). Radiomic features were extracted from the pre-treatment computed tomography (CT) images. Consensus clustering resulted in eleven and thirteen stable radiomic feature clusters for Lung and H & N cancer, respectively. These clusters were validated in independent external validation cohorts using rand statistic (Lung RS = 0.92, p < 0.001, H & N RS = 0.92, p < 0.001). Our analysis indicated both common as well as cancer-specific clustering and clinical associations of radiomic features. Strongest associations with clinical parameters: Prognosis Lung CI = 0.60 ± 0.01, Prognosis H & N CI = 0.68 ± 0.01; Lung histology AUC = 0.56 ± 0.03, Lung stage AUC = 0.61 ± 0.01, H & N HPV AUC = 0.58 ± 0.03, H & N stage AUC = 0.77 ± 0.02. Full utilization of these cancer-specific characteristics of image features may further improve radiomic biomarkers, providing a non-invasive way of quantifying and monitoring tumor phenotypic characteristics in clinical practice. Nature Publishing Group 2015-06-05 /pmc/articles/PMC4937496/ /pubmed/26251068 http://dx.doi.org/10.1038/srep11044 Text en Copyright © 2015, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Parmar, Chintan Leijenaar, Ralph T. H. Grossmann, Patrick Rios Velazquez, Emmanuel Bussink, Johan Rietveld, Derek Rietbergen, Michelle M. Haibe-Kains, Benjamin Lambin, Philippe Aerts, Hugo J.W.L. Radiomic feature clusters and Prognostic Signatures specific for Lung and Head & Neck cancer |
title | Radiomic feature clusters and Prognostic Signatures specific for Lung and Head & Neck cancer |
title_full | Radiomic feature clusters and Prognostic Signatures specific for Lung and Head & Neck cancer |
title_fullStr | Radiomic feature clusters and Prognostic Signatures specific for Lung and Head & Neck cancer |
title_full_unstemmed | Radiomic feature clusters and Prognostic Signatures specific for Lung and Head & Neck cancer |
title_short | Radiomic feature clusters and Prognostic Signatures specific for Lung and Head & Neck cancer |
title_sort | radiomic feature clusters and prognostic signatures specific for lung and head & neck cancer |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4937496/ https://www.ncbi.nlm.nih.gov/pubmed/26251068 http://dx.doi.org/10.1038/srep11044 |
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