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High quality genome sequence and description of Enterobacter mori strain 5–4, isolated from a mixture of formation water and crude-oil
Enterobacter mori strain 5–4 is a Gram-negative, motile, rod shaped, and facultatively anaerobic bacterium, which was isolated from a mixture of formation water (also known as oil-reservior water) and crude-oil in Karamay oilfield, China. To date, there is only one E. mori genome has been sequenced...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4940761/ https://www.ncbi.nlm.nih.gov/pubmed/27408680 http://dx.doi.org/10.1186/1944-3277-10-9 |
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author | Zhang, Fan Su, Sanbao Yu, Gaoming Zheng, Beiwen Shu, Fuchang Wang, Zhengliang Xiang, Tingsheng Dong, Hao Zhang, Zhongzhi Hou, DuJie She, Yuehui |
author_facet | Zhang, Fan Su, Sanbao Yu, Gaoming Zheng, Beiwen Shu, Fuchang Wang, Zhengliang Xiang, Tingsheng Dong, Hao Zhang, Zhongzhi Hou, DuJie She, Yuehui |
author_sort | Zhang, Fan |
collection | PubMed |
description | Enterobacter mori strain 5–4 is a Gram-negative, motile, rod shaped, and facultatively anaerobic bacterium, which was isolated from a mixture of formation water (also known as oil-reservior water) and crude-oil in Karamay oilfield, China. To date, there is only one E. mori genome has been sequenced and very little knowledge about the mechanism of E. mori adapted to the petroleum reservoir. Here, we report the second E. mori genome sequence and annotation, together with the description of features for this organism. The 4,621,281 bp assembly genome exhibits a G + C content of 56.24% and contains 4,317 protein-coding and 65 RNA genes, including 5 rRNA genes. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/1944-3277-10-9) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4940761 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-49407612016-07-13 High quality genome sequence and description of Enterobacter mori strain 5–4, isolated from a mixture of formation water and crude-oil Zhang, Fan Su, Sanbao Yu, Gaoming Zheng, Beiwen Shu, Fuchang Wang, Zhengliang Xiang, Tingsheng Dong, Hao Zhang, Zhongzhi Hou, DuJie She, Yuehui Stand Genomic Sci Short Genome Report Enterobacter mori strain 5–4 is a Gram-negative, motile, rod shaped, and facultatively anaerobic bacterium, which was isolated from a mixture of formation water (also known as oil-reservior water) and crude-oil in Karamay oilfield, China. To date, there is only one E. mori genome has been sequenced and very little knowledge about the mechanism of E. mori adapted to the petroleum reservoir. Here, we report the second E. mori genome sequence and annotation, together with the description of features for this organism. The 4,621,281 bp assembly genome exhibits a G + C content of 56.24% and contains 4,317 protein-coding and 65 RNA genes, including 5 rRNA genes. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/1944-3277-10-9) contains supplementary material, which is available to authorized users. BioMed Central 2015-02-27 /pmc/articles/PMC4940761/ /pubmed/27408680 http://dx.doi.org/10.1186/1944-3277-10-9 Text en © Zhang et al.; licensee BioMed Central. 2015 This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Short Genome Report Zhang, Fan Su, Sanbao Yu, Gaoming Zheng, Beiwen Shu, Fuchang Wang, Zhengliang Xiang, Tingsheng Dong, Hao Zhang, Zhongzhi Hou, DuJie She, Yuehui High quality genome sequence and description of Enterobacter mori strain 5–4, isolated from a mixture of formation water and crude-oil |
title | High quality genome sequence and description of Enterobacter mori strain 5–4, isolated from a mixture of formation water and crude-oil |
title_full | High quality genome sequence and description of Enterobacter mori strain 5–4, isolated from a mixture of formation water and crude-oil |
title_fullStr | High quality genome sequence and description of Enterobacter mori strain 5–4, isolated from a mixture of formation water and crude-oil |
title_full_unstemmed | High quality genome sequence and description of Enterobacter mori strain 5–4, isolated from a mixture of formation water and crude-oil |
title_short | High quality genome sequence and description of Enterobacter mori strain 5–4, isolated from a mixture of formation water and crude-oil |
title_sort | high quality genome sequence and description of enterobacter mori strain 5–4, isolated from a mixture of formation water and crude-oil |
topic | Short Genome Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4940761/ https://www.ncbi.nlm.nih.gov/pubmed/27408680 http://dx.doi.org/10.1186/1944-3277-10-9 |
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