Cargando…
Reversible thermal unfolding of a yfdX protein with chaperone-like activity
yfdX proteins are ubiquitously present in a large number of virulent bacteria. A member of this family of protein in E. coli is known to be up-regulated by the multidrug response regulator. Their abundance in such bacteria suggests some important yet unidentified functional role of this protein. Her...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4941729/ https://www.ncbi.nlm.nih.gov/pubmed/27404435 http://dx.doi.org/10.1038/srep29541 |
_version_ | 1782442341259280384 |
---|---|
author | Saha, Paramita Manna, Camelia Chakrabarti, Jaydeb Ghosh, Mahua |
author_facet | Saha, Paramita Manna, Camelia Chakrabarti, Jaydeb Ghosh, Mahua |
author_sort | Saha, Paramita |
collection | PubMed |
description | yfdX proteins are ubiquitously present in a large number of virulent bacteria. A member of this family of protein in E. coli is known to be up-regulated by the multidrug response regulator. Their abundance in such bacteria suggests some important yet unidentified functional role of this protein. Here, we study the thermal response and stability of yfdX protein STY3178 from Salmonella Typhi using circular dichroism, steady state fluorescence, dynamic light scattering and nuclear magnetic resonance experiments. We observe the protein to be stable up to a temperature of 45 °C. It folds back to the native conformation from unfolded state at temperature as high as 80 °C. The kinetic measurements of unfolding and refolding show Arrhenius behavior where the refolding involves less activation energy barrier than that of unfolding. We propose a homology model to understand the stability of the protein. Our molecular dynamic simulation studies on this model structure at high temperature show that the structure of this protein is quite stable. Finally, we report a possible functional role of this protein as a chaperone, capable of preventing DTT induced aggregation of insulin. Our studies will have broader implication in understanding the role of yfdX proteins in bacterial function and virulence. |
format | Online Article Text |
id | pubmed-4941729 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-49417292016-07-20 Reversible thermal unfolding of a yfdX protein with chaperone-like activity Saha, Paramita Manna, Camelia Chakrabarti, Jaydeb Ghosh, Mahua Sci Rep Article yfdX proteins are ubiquitously present in a large number of virulent bacteria. A member of this family of protein in E. coli is known to be up-regulated by the multidrug response regulator. Their abundance in such bacteria suggests some important yet unidentified functional role of this protein. Here, we study the thermal response and stability of yfdX protein STY3178 from Salmonella Typhi using circular dichroism, steady state fluorescence, dynamic light scattering and nuclear magnetic resonance experiments. We observe the protein to be stable up to a temperature of 45 °C. It folds back to the native conformation from unfolded state at temperature as high as 80 °C. The kinetic measurements of unfolding and refolding show Arrhenius behavior where the refolding involves less activation energy barrier than that of unfolding. We propose a homology model to understand the stability of the protein. Our molecular dynamic simulation studies on this model structure at high temperature show that the structure of this protein is quite stable. Finally, we report a possible functional role of this protein as a chaperone, capable of preventing DTT induced aggregation of insulin. Our studies will have broader implication in understanding the role of yfdX proteins in bacterial function and virulence. Nature Publishing Group 2016-07-11 /pmc/articles/PMC4941729/ /pubmed/27404435 http://dx.doi.org/10.1038/srep29541 Text en Copyright © 2016, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Saha, Paramita Manna, Camelia Chakrabarti, Jaydeb Ghosh, Mahua Reversible thermal unfolding of a yfdX protein with chaperone-like activity |
title | Reversible thermal unfolding of a yfdX protein with chaperone-like activity |
title_full | Reversible thermal unfolding of a yfdX protein with chaperone-like activity |
title_fullStr | Reversible thermal unfolding of a yfdX protein with chaperone-like activity |
title_full_unstemmed | Reversible thermal unfolding of a yfdX protein with chaperone-like activity |
title_short | Reversible thermal unfolding of a yfdX protein with chaperone-like activity |
title_sort | reversible thermal unfolding of a yfdx protein with chaperone-like activity |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4941729/ https://www.ncbi.nlm.nih.gov/pubmed/27404435 http://dx.doi.org/10.1038/srep29541 |
work_keys_str_mv | AT sahaparamita reversiblethermalunfoldingofayfdxproteinwithchaperonelikeactivity AT mannacamelia reversiblethermalunfoldingofayfdxproteinwithchaperonelikeactivity AT chakrabartijaydeb reversiblethermalunfoldingofayfdxproteinwithchaperonelikeactivity AT ghoshmahua reversiblethermalunfoldingofayfdxproteinwithchaperonelikeactivity |