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Genome-Wide Analysis of the bZIP Gene Family Identifies Two ABI5-Like bZIP Transcription Factors, BrABI5a and BrABI5b, as Positive Modulators of ABA Signalling in Chinese Cabbage
bZIP (basic leucine zipper) transcription factors coordinate plant growth and development and control responses to environmental stimuli. The genome of Chinese cabbage (Brassica rapa) encodes 136 putative bZIP transcription factors. The bZIP transcription factors in Brassica rapa (BrbZIP) are classi...
Autores principales: | , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4944949/ https://www.ncbi.nlm.nih.gov/pubmed/27414644 http://dx.doi.org/10.1371/journal.pone.0158966 |
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author | Bai, Yili Zhu, Wenbo Hu, Xiaochen Sun, Congcong Li, Yanlin Wang, Dandan Wang, Qinhu Pei, Guoliang Zhang, Yanfeng Guo, Aiguang Zhao, Huixian Lu, Haibin Mu, Xiaoqian Hu, Jingjiang Zhou, Xiaona Xie, Chang Gen |
author_facet | Bai, Yili Zhu, Wenbo Hu, Xiaochen Sun, Congcong Li, Yanlin Wang, Dandan Wang, Qinhu Pei, Guoliang Zhang, Yanfeng Guo, Aiguang Zhao, Huixian Lu, Haibin Mu, Xiaoqian Hu, Jingjiang Zhou, Xiaona Xie, Chang Gen |
author_sort | Bai, Yili |
collection | PubMed |
description | bZIP (basic leucine zipper) transcription factors coordinate plant growth and development and control responses to environmental stimuli. The genome of Chinese cabbage (Brassica rapa) encodes 136 putative bZIP transcription factors. The bZIP transcription factors in Brassica rapa (BrbZIP) are classified into 10 subfamilies. Phylogenetic relationship analysis reveals that subfamily A consists of 23 BrbZIPs. Two BrbZIPs within subfamily A, Bra005287 and Bra017251, display high similarity to ABI5 (ABA Insensitive 5). Expression of subfamily A BrbZIPs, like BrABI5a (Bra005287/BrbZIP14) and BrABI5b (Bra017251/BrbZIP13), are significantly induced by the plant hormone ABA. Subcellular localization assay reveal that both BrABI5a and BrABI5b have a nuclear localization. BrABI5a and BrABI5b could directly stimulate ABA Responsive Element-driven HIS (a HIS3 reporter gene, which confers His prototrophy) or LUC (LUCIFERASE) expression in yeast and Arabidopsis protoplast. Deletion of the bZIP motif abolished BrABI5a and BrABI5b transcriptional activity. The ABA insensitive phenotype of Arabidopsis abi5-1 is completely suppressed in transgenic lines expressing BrABI5a or BrABI5b. Overall, these results suggest that ABI5 orthologs, BrABI5a and BrABI5b, have key roles in ABA signalling in Chinese cabbage. |
format | Online Article Text |
id | pubmed-4944949 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-49449492016-08-08 Genome-Wide Analysis of the bZIP Gene Family Identifies Two ABI5-Like bZIP Transcription Factors, BrABI5a and BrABI5b, as Positive Modulators of ABA Signalling in Chinese Cabbage Bai, Yili Zhu, Wenbo Hu, Xiaochen Sun, Congcong Li, Yanlin Wang, Dandan Wang, Qinhu Pei, Guoliang Zhang, Yanfeng Guo, Aiguang Zhao, Huixian Lu, Haibin Mu, Xiaoqian Hu, Jingjiang Zhou, Xiaona Xie, Chang Gen PLoS One Research Article bZIP (basic leucine zipper) transcription factors coordinate plant growth and development and control responses to environmental stimuli. The genome of Chinese cabbage (Brassica rapa) encodes 136 putative bZIP transcription factors. The bZIP transcription factors in Brassica rapa (BrbZIP) are classified into 10 subfamilies. Phylogenetic relationship analysis reveals that subfamily A consists of 23 BrbZIPs. Two BrbZIPs within subfamily A, Bra005287 and Bra017251, display high similarity to ABI5 (ABA Insensitive 5). Expression of subfamily A BrbZIPs, like BrABI5a (Bra005287/BrbZIP14) and BrABI5b (Bra017251/BrbZIP13), are significantly induced by the plant hormone ABA. Subcellular localization assay reveal that both BrABI5a and BrABI5b have a nuclear localization. BrABI5a and BrABI5b could directly stimulate ABA Responsive Element-driven HIS (a HIS3 reporter gene, which confers His prototrophy) or LUC (LUCIFERASE) expression in yeast and Arabidopsis protoplast. Deletion of the bZIP motif abolished BrABI5a and BrABI5b transcriptional activity. The ABA insensitive phenotype of Arabidopsis abi5-1 is completely suppressed in transgenic lines expressing BrABI5a or BrABI5b. Overall, these results suggest that ABI5 orthologs, BrABI5a and BrABI5b, have key roles in ABA signalling in Chinese cabbage. Public Library of Science 2016-07-14 /pmc/articles/PMC4944949/ /pubmed/27414644 http://dx.doi.org/10.1371/journal.pone.0158966 Text en © 2016 Bai et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Bai, Yili Zhu, Wenbo Hu, Xiaochen Sun, Congcong Li, Yanlin Wang, Dandan Wang, Qinhu Pei, Guoliang Zhang, Yanfeng Guo, Aiguang Zhao, Huixian Lu, Haibin Mu, Xiaoqian Hu, Jingjiang Zhou, Xiaona Xie, Chang Gen Genome-Wide Analysis of the bZIP Gene Family Identifies Two ABI5-Like bZIP Transcription Factors, BrABI5a and BrABI5b, as Positive Modulators of ABA Signalling in Chinese Cabbage |
title | Genome-Wide Analysis of the bZIP Gene Family Identifies Two ABI5-Like bZIP Transcription Factors, BrABI5a and BrABI5b, as Positive Modulators of ABA Signalling in Chinese Cabbage |
title_full | Genome-Wide Analysis of the bZIP Gene Family Identifies Two ABI5-Like bZIP Transcription Factors, BrABI5a and BrABI5b, as Positive Modulators of ABA Signalling in Chinese Cabbage |
title_fullStr | Genome-Wide Analysis of the bZIP Gene Family Identifies Two ABI5-Like bZIP Transcription Factors, BrABI5a and BrABI5b, as Positive Modulators of ABA Signalling in Chinese Cabbage |
title_full_unstemmed | Genome-Wide Analysis of the bZIP Gene Family Identifies Two ABI5-Like bZIP Transcription Factors, BrABI5a and BrABI5b, as Positive Modulators of ABA Signalling in Chinese Cabbage |
title_short | Genome-Wide Analysis of the bZIP Gene Family Identifies Two ABI5-Like bZIP Transcription Factors, BrABI5a and BrABI5b, as Positive Modulators of ABA Signalling in Chinese Cabbage |
title_sort | genome-wide analysis of the bzip gene family identifies two abi5-like bzip transcription factors, brabi5a and brabi5b, as positive modulators of aba signalling in chinese cabbage |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4944949/ https://www.ncbi.nlm.nih.gov/pubmed/27414644 http://dx.doi.org/10.1371/journal.pone.0158966 |
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