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DNA Metabarcoding Reveals Diet Overlap between the Endangered Walia Ibex and Domestic Goats - Implications for Conservation

Human population expansion and associated degradation of the habitat of many wildlife species cause loss of biodiversity and species extinctions. The small Simen Mountains National Park in Ethiopia is one of the last strongholds for the preservation of a number of afro-alpine mammals, plants and bir...

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Autores principales: Gebremedhin, Berihun, Flagstad, Øystein, Bekele, Afework, Chala, Desalegn, Bakkestuen, Vegar, Boessenkool, Sanne, Popp, Magnus, Gussarova, Galina, Schrøder-Nielsen, Audun, Nemomissa, Sileshi, Brochmann, Christian, Stenseth, Nils Chr., Epp, Laura S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4945080/
https://www.ncbi.nlm.nih.gov/pubmed/27416020
http://dx.doi.org/10.1371/journal.pone.0159133
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author Gebremedhin, Berihun
Flagstad, Øystein
Bekele, Afework
Chala, Desalegn
Bakkestuen, Vegar
Boessenkool, Sanne
Popp, Magnus
Gussarova, Galina
Schrøder-Nielsen, Audun
Nemomissa, Sileshi
Brochmann, Christian
Stenseth, Nils Chr.
Epp, Laura S.
author_facet Gebremedhin, Berihun
Flagstad, Øystein
Bekele, Afework
Chala, Desalegn
Bakkestuen, Vegar
Boessenkool, Sanne
Popp, Magnus
Gussarova, Galina
Schrøder-Nielsen, Audun
Nemomissa, Sileshi
Brochmann, Christian
Stenseth, Nils Chr.
Epp, Laura S.
author_sort Gebremedhin, Berihun
collection PubMed
description Human population expansion and associated degradation of the habitat of many wildlife species cause loss of biodiversity and species extinctions. The small Simen Mountains National Park in Ethiopia is one of the last strongholds for the preservation of a number of afro-alpine mammals, plants and birds, and it is home to the rare endemic Walia ibex, Capra walie. The narrow distribution range of this species as well as potential competition for resources with livestock, especially with domestic goat, Capra hircus, may compromise its future survival. Based on a curated afro-alpine taxonomic reference library constructed for plant taxon identification, we investigated the diet of the Walia ibex and addressed the dietary overlap with domestic goat using DNA metabarcoding of faecal samples. Faeces of both species were collected from different localities in the National Park. We show that both species are browsers, with forbs, shrubs and trees comprising the largest proportion of their diet, supplemented by grasses. There was a considerable overlap in dietary preferences. Several of the preferred diet items of the Walia ibex (Alchemilla sp., Hypericum revolutum, Erica arborea and Rumex sp.) were also among the most preferred diet items of the domestic goat. These results indicate that there is potential for competition between the two species, especially during the dry season, when resources are limited. Our findings, in combination with the expected increase in domestic herbivores, suggest that management plans should consider the potential threat posed by domestic goats to ensure future survival of the endangered Walia ibex.
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spelling pubmed-49450802016-08-08 DNA Metabarcoding Reveals Diet Overlap between the Endangered Walia Ibex and Domestic Goats - Implications for Conservation Gebremedhin, Berihun Flagstad, Øystein Bekele, Afework Chala, Desalegn Bakkestuen, Vegar Boessenkool, Sanne Popp, Magnus Gussarova, Galina Schrøder-Nielsen, Audun Nemomissa, Sileshi Brochmann, Christian Stenseth, Nils Chr. Epp, Laura S. PLoS One Research Article Human population expansion and associated degradation of the habitat of many wildlife species cause loss of biodiversity and species extinctions. The small Simen Mountains National Park in Ethiopia is one of the last strongholds for the preservation of a number of afro-alpine mammals, plants and birds, and it is home to the rare endemic Walia ibex, Capra walie. The narrow distribution range of this species as well as potential competition for resources with livestock, especially with domestic goat, Capra hircus, may compromise its future survival. Based on a curated afro-alpine taxonomic reference library constructed for plant taxon identification, we investigated the diet of the Walia ibex and addressed the dietary overlap with domestic goat using DNA metabarcoding of faecal samples. Faeces of both species were collected from different localities in the National Park. We show that both species are browsers, with forbs, shrubs and trees comprising the largest proportion of their diet, supplemented by grasses. There was a considerable overlap in dietary preferences. Several of the preferred diet items of the Walia ibex (Alchemilla sp., Hypericum revolutum, Erica arborea and Rumex sp.) were also among the most preferred diet items of the domestic goat. These results indicate that there is potential for competition between the two species, especially during the dry season, when resources are limited. Our findings, in combination with the expected increase in domestic herbivores, suggest that management plans should consider the potential threat posed by domestic goats to ensure future survival of the endangered Walia ibex. Public Library of Science 2016-07-14 /pmc/articles/PMC4945080/ /pubmed/27416020 http://dx.doi.org/10.1371/journal.pone.0159133 Text en © 2016 Gebremedhin et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Gebremedhin, Berihun
Flagstad, Øystein
Bekele, Afework
Chala, Desalegn
Bakkestuen, Vegar
Boessenkool, Sanne
Popp, Magnus
Gussarova, Galina
Schrøder-Nielsen, Audun
Nemomissa, Sileshi
Brochmann, Christian
Stenseth, Nils Chr.
Epp, Laura S.
DNA Metabarcoding Reveals Diet Overlap between the Endangered Walia Ibex and Domestic Goats - Implications for Conservation
title DNA Metabarcoding Reveals Diet Overlap between the Endangered Walia Ibex and Domestic Goats - Implications for Conservation
title_full DNA Metabarcoding Reveals Diet Overlap between the Endangered Walia Ibex and Domestic Goats - Implications for Conservation
title_fullStr DNA Metabarcoding Reveals Diet Overlap between the Endangered Walia Ibex and Domestic Goats - Implications for Conservation
title_full_unstemmed DNA Metabarcoding Reveals Diet Overlap between the Endangered Walia Ibex and Domestic Goats - Implications for Conservation
title_short DNA Metabarcoding Reveals Diet Overlap between the Endangered Walia Ibex and Domestic Goats - Implications for Conservation
title_sort dna metabarcoding reveals diet overlap between the endangered walia ibex and domestic goats - implications for conservation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4945080/
https://www.ncbi.nlm.nih.gov/pubmed/27416020
http://dx.doi.org/10.1371/journal.pone.0159133
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