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Microfluidic Cell Deformability Assay for Rapid and Efficient Kinase Screening with the CRISPR‐Cas9 System

Herein we report a CRISPR‐Cas9‐mediated loss‐of‐function kinase screen for cancer cell deformability and invasive potential in a high‐throughput microfluidic chip. In this microfluidic cell separation platform, flexible cells with high deformability and metastatic propensity flowed out, while stiff...

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Detalles Bibliográficos
Autores principales: Han, Xin, Liu, Zongbin, Zhao, Li, Wang, Feng, Yu, Yang, Yang, Jianhua, Chen, Rui, Qin, Lidong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4945455/
https://www.ncbi.nlm.nih.gov/pubmed/27258939
http://dx.doi.org/10.1002/anie.201601984
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author Han, Xin
Liu, Zongbin
Zhao, Li
Wang, Feng
Yu, Yang
Yang, Jianhua
Chen, Rui
Qin, Lidong
author_facet Han, Xin
Liu, Zongbin
Zhao, Li
Wang, Feng
Yu, Yang
Yang, Jianhua
Chen, Rui
Qin, Lidong
author_sort Han, Xin
collection PubMed
description Herein we report a CRISPR‐Cas9‐mediated loss‐of‐function kinase screen for cancer cell deformability and invasive potential in a high‐throughput microfluidic chip. In this microfluidic cell separation platform, flexible cells with high deformability and metastatic propensity flowed out, while stiff cells remained trapped. Through deep sequencing, we found that loss of certain kinases resulted in cells becoming more deformable and invasive. High‐ranking candidates identified included well‐reported tumor suppressor kinases, such as chk2, IKK‐α, p38 MAPKs, and DAPK2. A high‐ranking candidate STK4 was chosen for functional validation and identified to play an important role in the regulation of cell deformability and tumor suppression. Collectively, we have demonstrated that CRISPR‐based on‐chip mechanical screening is a potentially powerful strategy to facilitate systematic genetic analyses.
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spelling pubmed-49454552016-07-18 Microfluidic Cell Deformability Assay for Rapid and Efficient Kinase Screening with the CRISPR‐Cas9 System Han, Xin Liu, Zongbin Zhao, Li Wang, Feng Yu, Yang Yang, Jianhua Chen, Rui Qin, Lidong Angew Chem Int Ed Engl Communications Herein we report a CRISPR‐Cas9‐mediated loss‐of‐function kinase screen for cancer cell deformability and invasive potential in a high‐throughput microfluidic chip. In this microfluidic cell separation platform, flexible cells with high deformability and metastatic propensity flowed out, while stiff cells remained trapped. Through deep sequencing, we found that loss of certain kinases resulted in cells becoming more deformable and invasive. High‐ranking candidates identified included well‐reported tumor suppressor kinases, such as chk2, IKK‐α, p38 MAPKs, and DAPK2. A high‐ranking candidate STK4 was chosen for functional validation and identified to play an important role in the regulation of cell deformability and tumor suppression. Collectively, we have demonstrated that CRISPR‐based on‐chip mechanical screening is a potentially powerful strategy to facilitate systematic genetic analyses. John Wiley and Sons Inc. 2016-06-03 2016-07-18 /pmc/articles/PMC4945455/ /pubmed/27258939 http://dx.doi.org/10.1002/anie.201601984 Text en © 2016 The Authors. Published by Wiley-VCH Verlag GmbH & Co. KGaA. This is an open access article under the terms of the Creative Commons Attribution‐NonCommercial‐NoDerivs (http://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Communications
Han, Xin
Liu, Zongbin
Zhao, Li
Wang, Feng
Yu, Yang
Yang, Jianhua
Chen, Rui
Qin, Lidong
Microfluidic Cell Deformability Assay for Rapid and Efficient Kinase Screening with the CRISPR‐Cas9 System
title Microfluidic Cell Deformability Assay for Rapid and Efficient Kinase Screening with the CRISPR‐Cas9 System
title_full Microfluidic Cell Deformability Assay for Rapid and Efficient Kinase Screening with the CRISPR‐Cas9 System
title_fullStr Microfluidic Cell Deformability Assay for Rapid and Efficient Kinase Screening with the CRISPR‐Cas9 System
title_full_unstemmed Microfluidic Cell Deformability Assay for Rapid and Efficient Kinase Screening with the CRISPR‐Cas9 System
title_short Microfluidic Cell Deformability Assay for Rapid and Efficient Kinase Screening with the CRISPR‐Cas9 System
title_sort microfluidic cell deformability assay for rapid and efficient kinase screening with the crispr‐cas9 system
topic Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4945455/
https://www.ncbi.nlm.nih.gov/pubmed/27258939
http://dx.doi.org/10.1002/anie.201601984
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