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Characterization of a potential ABC-type bacteriocin exporter protein from Treponema denticola

BACKGROUND: Treponema denticola is strongly associated with the development of periodontal disease. Both synergistic and antagonistic effects are observed among bacterial species in the process of biofilm formation. Bacteriocin-related genes have not yet been fully characterized in periodontopathic...

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Autores principales: Tanaka-Kumazawa, Kimiko, Kikuchi, Yuichiro, Sano-Kokubun, Yumiko, Shintani, Seikou, Yakushiji, Masashi, Kuramitsu, Howard K., Ishihara, Kazuyuki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4947327/
https://www.ncbi.nlm.nih.gov/pubmed/27422166
http://dx.doi.org/10.1186/s12903-016-0243-7
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author Tanaka-Kumazawa, Kimiko
Kikuchi, Yuichiro
Sano-Kokubun, Yumiko
Shintani, Seikou
Yakushiji, Masashi
Kuramitsu, Howard K.
Ishihara, Kazuyuki
author_facet Tanaka-Kumazawa, Kimiko
Kikuchi, Yuichiro
Sano-Kokubun, Yumiko
Shintani, Seikou
Yakushiji, Masashi
Kuramitsu, Howard K.
Ishihara, Kazuyuki
author_sort Tanaka-Kumazawa, Kimiko
collection PubMed
description BACKGROUND: Treponema denticola is strongly associated with the development of periodontal disease. Both synergistic and antagonistic effects are observed among bacterial species in the process of biofilm formation. Bacteriocin-related genes have not yet been fully characterized in periodontopathic bacteria. The aim of this study was to detect and characterize bacteriocin-associated proteins in T. denticola. METHODS: The whole genome sequence of T. denticola ATCC 35405 was screened with a Streptococcus mutans bacteriocin immunity protein (ImmA/Bip) sequence. The prevalence of homologous genes in T. denticola strains was then investigated by Southern blotting. Expression of the genes was evaluated by qRT-PCR. RESULTS: In the genome sequence of T. denticola, an amino acid sequence coded by the open reading frame TDE_0719 showed 26 % identity with the S. mutans ImmA. Furthermore, two protein sequences encoded by TDE_0425 and TDE_2431 in T. denticola ATCC 35405 showed ~40 % identity with that coded by TDE_0719. Therefore, TDE_0425, TDE_0719, and TDE_2431 were designated as tepA1, A2, and A3, respectively. Open reading frames showing similarity to the HlyD family of secretion proteins were detected downstream of tepA1, A2, and A3. They were designated as tepB1, B2, and B3, respectively. A gene harboring a bacteriocin-like signal sequence was detected upstream of tepA1. The prevalence of tepA1 and A2 differed among Treponema species. Susceptibility to chloramphenicol and ofloxacin was slightly decreased in a tepA2 mutant while that to kanamycin was increased. Expression of tepA3-B3 was increased in the tepA2 mutant. CONCLUSION: These results indicate that T. denticola ATCC 35405 has three potential bacteriocin export proteins and that the presence of these genes differs among the Treponema strains. TepA3-B3 of the corresponding proteins may be involved in resistance to chloramphenicol.
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spelling pubmed-49473272016-07-17 Characterization of a potential ABC-type bacteriocin exporter protein from Treponema denticola Tanaka-Kumazawa, Kimiko Kikuchi, Yuichiro Sano-Kokubun, Yumiko Shintani, Seikou Yakushiji, Masashi Kuramitsu, Howard K. Ishihara, Kazuyuki BMC Oral Health Research Article BACKGROUND: Treponema denticola is strongly associated with the development of periodontal disease. Both synergistic and antagonistic effects are observed among bacterial species in the process of biofilm formation. Bacteriocin-related genes have not yet been fully characterized in periodontopathic bacteria. The aim of this study was to detect and characterize bacteriocin-associated proteins in T. denticola. METHODS: The whole genome sequence of T. denticola ATCC 35405 was screened with a Streptococcus mutans bacteriocin immunity protein (ImmA/Bip) sequence. The prevalence of homologous genes in T. denticola strains was then investigated by Southern blotting. Expression of the genes was evaluated by qRT-PCR. RESULTS: In the genome sequence of T. denticola, an amino acid sequence coded by the open reading frame TDE_0719 showed 26 % identity with the S. mutans ImmA. Furthermore, two protein sequences encoded by TDE_0425 and TDE_2431 in T. denticola ATCC 35405 showed ~40 % identity with that coded by TDE_0719. Therefore, TDE_0425, TDE_0719, and TDE_2431 were designated as tepA1, A2, and A3, respectively. Open reading frames showing similarity to the HlyD family of secretion proteins were detected downstream of tepA1, A2, and A3. They were designated as tepB1, B2, and B3, respectively. A gene harboring a bacteriocin-like signal sequence was detected upstream of tepA1. The prevalence of tepA1 and A2 differed among Treponema species. Susceptibility to chloramphenicol and ofloxacin was slightly decreased in a tepA2 mutant while that to kanamycin was increased. Expression of tepA3-B3 was increased in the tepA2 mutant. CONCLUSION: These results indicate that T. denticola ATCC 35405 has three potential bacteriocin export proteins and that the presence of these genes differs among the Treponema strains. TepA3-B3 of the corresponding proteins may be involved in resistance to chloramphenicol. BioMed Central 2016-07-16 /pmc/articles/PMC4947327/ /pubmed/27422166 http://dx.doi.org/10.1186/s12903-016-0243-7 Text en © The Author(s). 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Tanaka-Kumazawa, Kimiko
Kikuchi, Yuichiro
Sano-Kokubun, Yumiko
Shintani, Seikou
Yakushiji, Masashi
Kuramitsu, Howard K.
Ishihara, Kazuyuki
Characterization of a potential ABC-type bacteriocin exporter protein from Treponema denticola
title Characterization of a potential ABC-type bacteriocin exporter protein from Treponema denticola
title_full Characterization of a potential ABC-type bacteriocin exporter protein from Treponema denticola
title_fullStr Characterization of a potential ABC-type bacteriocin exporter protein from Treponema denticola
title_full_unstemmed Characterization of a potential ABC-type bacteriocin exporter protein from Treponema denticola
title_short Characterization of a potential ABC-type bacteriocin exporter protein from Treponema denticola
title_sort characterization of a potential abc-type bacteriocin exporter protein from treponema denticola
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4947327/
https://www.ncbi.nlm.nih.gov/pubmed/27422166
http://dx.doi.org/10.1186/s12903-016-0243-7
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