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Development of a quadruplex loop-mediated isothermal amplification assay for field detection of four Vibrio species associated with fish disease

A quadruplex loop-mediated isothermal amplification (LAMP) method was developed to detect four Vibrio species, including Vibrio ichthyoenteri, Vibrioparahaemolyticus, Vibrioscophthalmi, and Vibrio vulnificus, simultaneously. Four sets of species-specific primers were designed with different restrict...

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Autores principales: Zhou, Shun, Gao, Zhi-xin, Zhang, Min, Liu, Dan-yang, Zhao, Xin-peng, Liu, Yong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4947467/
https://www.ncbi.nlm.nih.gov/pubmed/27468405
http://dx.doi.org/10.1186/s40064-016-2760-x
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author Zhou, Shun
Gao, Zhi-xin
Zhang, Min
Liu, Dan-yang
Zhao, Xin-peng
Liu, Yong
author_facet Zhou, Shun
Gao, Zhi-xin
Zhang, Min
Liu, Dan-yang
Zhao, Xin-peng
Liu, Yong
author_sort Zhou, Shun
collection PubMed
description A quadruplex loop-mediated isothermal amplification (LAMP) method was developed to detect four Vibrio species, including Vibrio ichthyoenteri, Vibrioparahaemolyticus, Vibrioscophthalmi, and Vibrio vulnificus, simultaneously. Four sets of species-specific primers were designed with different restriction sites contained in the inner primers. The quadruplex LAMP method could distinguish four Vibrio species via the subsequent restriction enzyme analysis. The sensitivity of the quadruplex LAMP method were 10(2)–10(3) times higher than the sensitivity of conventional PCR. V. scophthalmi, V. vulnificus, V. parahaemolyticus and V. ichthyoenteri could be detected in the different tissues of the infected fish by the quadruplex LAMP method simply and conveniently through using SYBR Green I to facilitate visual inspection of the LAMP products. The method we developed in this study could be a simple and convenient diagnostic tool for field detection of Vibrio infection in fish.
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spelling pubmed-49474672016-07-27 Development of a quadruplex loop-mediated isothermal amplification assay for field detection of four Vibrio species associated with fish disease Zhou, Shun Gao, Zhi-xin Zhang, Min Liu, Dan-yang Zhao, Xin-peng Liu, Yong Springerplus Research A quadruplex loop-mediated isothermal amplification (LAMP) method was developed to detect four Vibrio species, including Vibrio ichthyoenteri, Vibrioparahaemolyticus, Vibrioscophthalmi, and Vibrio vulnificus, simultaneously. Four sets of species-specific primers were designed with different restriction sites contained in the inner primers. The quadruplex LAMP method could distinguish four Vibrio species via the subsequent restriction enzyme analysis. The sensitivity of the quadruplex LAMP method were 10(2)–10(3) times higher than the sensitivity of conventional PCR. V. scophthalmi, V. vulnificus, V. parahaemolyticus and V. ichthyoenteri could be detected in the different tissues of the infected fish by the quadruplex LAMP method simply and conveniently through using SYBR Green I to facilitate visual inspection of the LAMP products. The method we developed in this study could be a simple and convenient diagnostic tool for field detection of Vibrio infection in fish. Springer International Publishing 2016-07-16 /pmc/articles/PMC4947467/ /pubmed/27468405 http://dx.doi.org/10.1186/s40064-016-2760-x Text en © The Author(s) 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Research
Zhou, Shun
Gao, Zhi-xin
Zhang, Min
Liu, Dan-yang
Zhao, Xin-peng
Liu, Yong
Development of a quadruplex loop-mediated isothermal amplification assay for field detection of four Vibrio species associated with fish disease
title Development of a quadruplex loop-mediated isothermal amplification assay for field detection of four Vibrio species associated with fish disease
title_full Development of a quadruplex loop-mediated isothermal amplification assay for field detection of four Vibrio species associated with fish disease
title_fullStr Development of a quadruplex loop-mediated isothermal amplification assay for field detection of four Vibrio species associated with fish disease
title_full_unstemmed Development of a quadruplex loop-mediated isothermal amplification assay for field detection of four Vibrio species associated with fish disease
title_short Development of a quadruplex loop-mediated isothermal amplification assay for field detection of four Vibrio species associated with fish disease
title_sort development of a quadruplex loop-mediated isothermal amplification assay for field detection of four vibrio species associated with fish disease
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4947467/
https://www.ncbi.nlm.nih.gov/pubmed/27468405
http://dx.doi.org/10.1186/s40064-016-2760-x
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