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Development of a quadruplex loop-mediated isothermal amplification assay for field detection of four Vibrio species associated with fish disease
A quadruplex loop-mediated isothermal amplification (LAMP) method was developed to detect four Vibrio species, including Vibrio ichthyoenteri, Vibrioparahaemolyticus, Vibrioscophthalmi, and Vibrio vulnificus, simultaneously. Four sets of species-specific primers were designed with different restrict...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4947467/ https://www.ncbi.nlm.nih.gov/pubmed/27468405 http://dx.doi.org/10.1186/s40064-016-2760-x |
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author | Zhou, Shun Gao, Zhi-xin Zhang, Min Liu, Dan-yang Zhao, Xin-peng Liu, Yong |
author_facet | Zhou, Shun Gao, Zhi-xin Zhang, Min Liu, Dan-yang Zhao, Xin-peng Liu, Yong |
author_sort | Zhou, Shun |
collection | PubMed |
description | A quadruplex loop-mediated isothermal amplification (LAMP) method was developed to detect four Vibrio species, including Vibrio ichthyoenteri, Vibrioparahaemolyticus, Vibrioscophthalmi, and Vibrio vulnificus, simultaneously. Four sets of species-specific primers were designed with different restriction sites contained in the inner primers. The quadruplex LAMP method could distinguish four Vibrio species via the subsequent restriction enzyme analysis. The sensitivity of the quadruplex LAMP method were 10(2)–10(3) times higher than the sensitivity of conventional PCR. V. scophthalmi, V. vulnificus, V. parahaemolyticus and V. ichthyoenteri could be detected in the different tissues of the infected fish by the quadruplex LAMP method simply and conveniently through using SYBR Green I to facilitate visual inspection of the LAMP products. The method we developed in this study could be a simple and convenient diagnostic tool for field detection of Vibrio infection in fish. |
format | Online Article Text |
id | pubmed-4947467 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-49474672016-07-27 Development of a quadruplex loop-mediated isothermal amplification assay for field detection of four Vibrio species associated with fish disease Zhou, Shun Gao, Zhi-xin Zhang, Min Liu, Dan-yang Zhao, Xin-peng Liu, Yong Springerplus Research A quadruplex loop-mediated isothermal amplification (LAMP) method was developed to detect four Vibrio species, including Vibrio ichthyoenteri, Vibrioparahaemolyticus, Vibrioscophthalmi, and Vibrio vulnificus, simultaneously. Four sets of species-specific primers were designed with different restriction sites contained in the inner primers. The quadruplex LAMP method could distinguish four Vibrio species via the subsequent restriction enzyme analysis. The sensitivity of the quadruplex LAMP method were 10(2)–10(3) times higher than the sensitivity of conventional PCR. V. scophthalmi, V. vulnificus, V. parahaemolyticus and V. ichthyoenteri could be detected in the different tissues of the infected fish by the quadruplex LAMP method simply and conveniently through using SYBR Green I to facilitate visual inspection of the LAMP products. The method we developed in this study could be a simple and convenient diagnostic tool for field detection of Vibrio infection in fish. Springer International Publishing 2016-07-16 /pmc/articles/PMC4947467/ /pubmed/27468405 http://dx.doi.org/10.1186/s40064-016-2760-x Text en © The Author(s) 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Research Zhou, Shun Gao, Zhi-xin Zhang, Min Liu, Dan-yang Zhao, Xin-peng Liu, Yong Development of a quadruplex loop-mediated isothermal amplification assay for field detection of four Vibrio species associated with fish disease |
title | Development of a quadruplex loop-mediated isothermal amplification assay for field detection of four Vibrio species associated with fish disease |
title_full | Development of a quadruplex loop-mediated isothermal amplification assay for field detection of four Vibrio species associated with fish disease |
title_fullStr | Development of a quadruplex loop-mediated isothermal amplification assay for field detection of four Vibrio species associated with fish disease |
title_full_unstemmed | Development of a quadruplex loop-mediated isothermal amplification assay for field detection of four Vibrio species associated with fish disease |
title_short | Development of a quadruplex loop-mediated isothermal amplification assay for field detection of four Vibrio species associated with fish disease |
title_sort | development of a quadruplex loop-mediated isothermal amplification assay for field detection of four vibrio species associated with fish disease |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4947467/ https://www.ncbi.nlm.nih.gov/pubmed/27468405 http://dx.doi.org/10.1186/s40064-016-2760-x |
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