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Near Equilibrium Calculus of Stem Cells in Application to the Airway Epithelium Lineage

Homeostatic maintenance of tissues is orchestrated by well tuned networks of cellular signaling. Such networks regulate, in a stochastic manner, fates of all cells within the respective lineages. Processes such as symmetric and asymmetric divisions, differentiation, de-differentiation, and death hav...

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Autores principales: Sun, Zheng, Plikus, Maksim V., Komarova, Natalia L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4948767/
https://www.ncbi.nlm.nih.gov/pubmed/27427948
http://dx.doi.org/10.1371/journal.pcbi.1004990
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author Sun, Zheng
Plikus, Maksim V.
Komarova, Natalia L.
author_facet Sun, Zheng
Plikus, Maksim V.
Komarova, Natalia L.
author_sort Sun, Zheng
collection PubMed
description Homeostatic maintenance of tissues is orchestrated by well tuned networks of cellular signaling. Such networks regulate, in a stochastic manner, fates of all cells within the respective lineages. Processes such as symmetric and asymmetric divisions, differentiation, de-differentiation, and death have to be controlled in a dynamic fashion, such that the cell population is maintained at a stable equilibrium, has a sufficiently low level of stochastic variation, and is capable of responding efficiently to external damage. Cellular lineages in real tissues may consist of a number of different cell types, connected by hierarchical relationships, albeit not necessarily linear, and engaged in a number of different processes. Here we develop a general mathematical methodology for near equilibrium studies of arbitrarily complex hierarchical cell populations, under regulation by a control network. This methodology allows us to (1) determine stability properties of the network, (2) calculate the stochastic variance, and (3) predict how different control mechanisms affect stability and robustness of the system. We demonstrate the versatility of this tool by using the example of the airway epithelium lineage. Recent research shows that airway epithelium stem cells divide mostly asymmetrically, while the so-called secretory cells divide predominantly symmetrically. It further provides quantitative data on the recovery dynamics of the airway epithelium, which can include secretory cell de-differentiation. Using our new methodology, we demonstrate that while a number of regulatory networks can be compatible with the observed recovery behavior, the observed division patterns of cells are the most optimal from the viewpoint of homeostatic lineage stability and minimizing the variation of the cell population size. This not only explains the observed yet poorly understood features of airway tissue architecture, but also helps to deduce the information on the still largely hypothetical regulatory mechanisms governing tissue turnover, and lends insight into how different control loops influence the stability and variance properties of cell populations.
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spelling pubmed-49487672016-08-01 Near Equilibrium Calculus of Stem Cells in Application to the Airway Epithelium Lineage Sun, Zheng Plikus, Maksim V. Komarova, Natalia L. PLoS Comput Biol Research Article Homeostatic maintenance of tissues is orchestrated by well tuned networks of cellular signaling. Such networks regulate, in a stochastic manner, fates of all cells within the respective lineages. Processes such as symmetric and asymmetric divisions, differentiation, de-differentiation, and death have to be controlled in a dynamic fashion, such that the cell population is maintained at a stable equilibrium, has a sufficiently low level of stochastic variation, and is capable of responding efficiently to external damage. Cellular lineages in real tissues may consist of a number of different cell types, connected by hierarchical relationships, albeit not necessarily linear, and engaged in a number of different processes. Here we develop a general mathematical methodology for near equilibrium studies of arbitrarily complex hierarchical cell populations, under regulation by a control network. This methodology allows us to (1) determine stability properties of the network, (2) calculate the stochastic variance, and (3) predict how different control mechanisms affect stability and robustness of the system. We demonstrate the versatility of this tool by using the example of the airway epithelium lineage. Recent research shows that airway epithelium stem cells divide mostly asymmetrically, while the so-called secretory cells divide predominantly symmetrically. It further provides quantitative data on the recovery dynamics of the airway epithelium, which can include secretory cell de-differentiation. Using our new methodology, we demonstrate that while a number of regulatory networks can be compatible with the observed recovery behavior, the observed division patterns of cells are the most optimal from the viewpoint of homeostatic lineage stability and minimizing the variation of the cell population size. This not only explains the observed yet poorly understood features of airway tissue architecture, but also helps to deduce the information on the still largely hypothetical regulatory mechanisms governing tissue turnover, and lends insight into how different control loops influence the stability and variance properties of cell populations. Public Library of Science 2016-07-18 /pmc/articles/PMC4948767/ /pubmed/27427948 http://dx.doi.org/10.1371/journal.pcbi.1004990 Text en © 2016 Sun et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Sun, Zheng
Plikus, Maksim V.
Komarova, Natalia L.
Near Equilibrium Calculus of Stem Cells in Application to the Airway Epithelium Lineage
title Near Equilibrium Calculus of Stem Cells in Application to the Airway Epithelium Lineage
title_full Near Equilibrium Calculus of Stem Cells in Application to the Airway Epithelium Lineage
title_fullStr Near Equilibrium Calculus of Stem Cells in Application to the Airway Epithelium Lineage
title_full_unstemmed Near Equilibrium Calculus of Stem Cells in Application to the Airway Epithelium Lineage
title_short Near Equilibrium Calculus of Stem Cells in Application to the Airway Epithelium Lineage
title_sort near equilibrium calculus of stem cells in application to the airway epithelium lineage
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4948767/
https://www.ncbi.nlm.nih.gov/pubmed/27427948
http://dx.doi.org/10.1371/journal.pcbi.1004990
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