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Development of 18 novel microsatellite primers for Begonia fimbristipula (Begoniaceae), an endangered medicinal plant in China(1)

PREMISE OF THE STUDY: Begonia fimbristipula (Begoniaceae) is a medicinal herb distributed in the Chinese provinces of Fujian, Guangdong, Guangxi, Hainan, Hunan, Jiangxi, and Zhejiang, and it is on the verge of extinction due to habitat destruction and deterioration of its ecosystem. Here we develope...

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Detalles Bibliográficos
Autores principales: Zhao, Bo, Du, Yun-Qian, Li, Jing-Jian, Tang, Wen-Xiu, Zhong, Shu-Hua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4948904/
https://www.ncbi.nlm.nih.gov/pubmed/27437176
http://dx.doi.org/10.3732/apps.1600004
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author Zhao, Bo
Du, Yun-Qian
Li, Jing-Jian
Tang, Wen-Xiu
Zhong, Shu-Hua
author_facet Zhao, Bo
Du, Yun-Qian
Li, Jing-Jian
Tang, Wen-Xiu
Zhong, Shu-Hua
author_sort Zhao, Bo
collection PubMed
description PREMISE OF THE STUDY: Begonia fimbristipula (Begoniaceae) is a medicinal herb distributed in the Chinese provinces of Fujian, Guangdong, Guangxi, Hainan, Hunan, Jiangxi, and Zhejiang, and it is on the verge of extinction due to habitat destruction and deterioration of its ecosystem. Here we developed a set of highly polymorphic microsatellite markers for population genetic and conservation studies of this endangered medicinal plant. METHODS AND RESULTS: Using the Fast Isolation by AFLP of Sequences COntaining repeats (FIASCO) protocol, 18 polymorphic microsatellite markers were identified within 48 individuals from two geographic locations. The observed and expected heterozygosities ranged from 0.208 to 1.000 and from 0.291 to 0.812, respectively. These microsatellite markers were cross-amplified in five related Begonia species, and six loci were successfully amplified in all species. CONCLUSIONS: These 18 markers will be useful for better conservation and utilization of wild resources of B. fimbristipula and other Begonia species in the future.
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spelling pubmed-49489042016-07-19 Development of 18 novel microsatellite primers for Begonia fimbristipula (Begoniaceae), an endangered medicinal plant in China(1) Zhao, Bo Du, Yun-Qian Li, Jing-Jian Tang, Wen-Xiu Zhong, Shu-Hua Appl Plant Sci Primer Note PREMISE OF THE STUDY: Begonia fimbristipula (Begoniaceae) is a medicinal herb distributed in the Chinese provinces of Fujian, Guangdong, Guangxi, Hainan, Hunan, Jiangxi, and Zhejiang, and it is on the verge of extinction due to habitat destruction and deterioration of its ecosystem. Here we developed a set of highly polymorphic microsatellite markers for population genetic and conservation studies of this endangered medicinal plant. METHODS AND RESULTS: Using the Fast Isolation by AFLP of Sequences COntaining repeats (FIASCO) protocol, 18 polymorphic microsatellite markers were identified within 48 individuals from two geographic locations. The observed and expected heterozygosities ranged from 0.208 to 1.000 and from 0.291 to 0.812, respectively. These microsatellite markers were cross-amplified in five related Begonia species, and six loci were successfully amplified in all species. CONCLUSIONS: These 18 markers will be useful for better conservation and utilization of wild resources of B. fimbristipula and other Begonia species in the future. Botanical Society of America 2016-07-13 /pmc/articles/PMC4948904/ /pubmed/27437176 http://dx.doi.org/10.3732/apps.1600004 Text en © 2016 Zhao et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA).
spellingShingle Primer Note
Zhao, Bo
Du, Yun-Qian
Li, Jing-Jian
Tang, Wen-Xiu
Zhong, Shu-Hua
Development of 18 novel microsatellite primers for Begonia fimbristipula (Begoniaceae), an endangered medicinal plant in China(1)
title Development of 18 novel microsatellite primers for Begonia fimbristipula (Begoniaceae), an endangered medicinal plant in China(1)
title_full Development of 18 novel microsatellite primers for Begonia fimbristipula (Begoniaceae), an endangered medicinal plant in China(1)
title_fullStr Development of 18 novel microsatellite primers for Begonia fimbristipula (Begoniaceae), an endangered medicinal plant in China(1)
title_full_unstemmed Development of 18 novel microsatellite primers for Begonia fimbristipula (Begoniaceae), an endangered medicinal plant in China(1)
title_short Development of 18 novel microsatellite primers for Begonia fimbristipula (Begoniaceae), an endangered medicinal plant in China(1)
title_sort development of 18 novel microsatellite primers for begonia fimbristipula (begoniaceae), an endangered medicinal plant in china(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4948904/
https://www.ncbi.nlm.nih.gov/pubmed/27437176
http://dx.doi.org/10.3732/apps.1600004
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