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Genome-Wide Association Study of Bone Mineral Density in Korean Men
Osteoporosis is a medical condition of global concern, with increasing incidence in both sexes. Bone mineral density (BMD), a highly heritable trait, has been proven a useful diagnostic factor in predicting fracture. Because medical information is lacking about male osteoporotic genetics, we conduct...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Korea Genome Organization
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4951402/ https://www.ncbi.nlm.nih.gov/pubmed/27445649 http://dx.doi.org/10.5808/GI.2016.14.2.62 |
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author | Bae, Ye Seul Im, Sun-Wha Kang, Mi So Kim, Jin Hee Lee, Soon Hang Cho, Be Long Park, Jin Ho Nam, You-Seon Son, Ho-Young Yang, San Deok Sung, Joohon Oh, Kwang Ho Yun, Jae Moon Kim, Jong Il |
author_facet | Bae, Ye Seul Im, Sun-Wha Kang, Mi So Kim, Jin Hee Lee, Soon Hang Cho, Be Long Park, Jin Ho Nam, You-Seon Son, Ho-Young Yang, San Deok Sung, Joohon Oh, Kwang Ho Yun, Jae Moon Kim, Jong Il |
author_sort | Bae, Ye Seul |
collection | PubMed |
description | Osteoporosis is a medical condition of global concern, with increasing incidence in both sexes. Bone mineral density (BMD), a highly heritable trait, has been proven a useful diagnostic factor in predicting fracture. Because medical information is lacking about male osteoporotic genetics, we conducted a genome-wide association study of BMD in Korean men. With 1,176 participants, we analyzed 4,414,664 single nucleotide polymorphisms (SNPs) after genomic imputation, and identified five SNPs and three loci correlated with bone density and strength. Multivariate linear regression models were applied to adjust for age and body mass index interference. Rs17124500 (p = 6.42 × 10(-7)), rs34594869 (p = 6.53 × 10(-7)) and rs17124504 (p = 6.53 × 10(-7)) in 14q31.3 and rs140155614 (p = 8.64 × 10(-7)) in 15q25.1 were significantly associated with lumbar spine BMD (LS-BMD), while rs111822233 (p = 6.35 × 10(-7)) was linked with the femur total BMD (FT-BMD). Additionally, we analyzed the relationship between BMD and five genes previously identified in Korean men. Rs61382873 (p = 0.0009) in LRP5, rs9567003 (p = 0.0033) in TNFSF11 and rs9935828 (p = 0.0248) in FOXL1 were observed for LS-BMD. Furthermore, rs33997547 (p = 0.0057) in ZBTB and rs1664496 (p = 0.0012) in MEF2C were found to influence FT-BMD and rs61769193 (p = 0.0114) in ZBTB to influence femur neck BMD. We identified five SNPs and three genomic regions, associated with BMD. The significance of our results lies in the discovery of new loci, while also affirming a previously significant locus, as potential osteoporotic factors in the Korean male population. |
format | Online Article Text |
id | pubmed-4951402 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Korea Genome Organization |
record_format | MEDLINE/PubMed |
spelling | pubmed-49514022016-07-21 Genome-Wide Association Study of Bone Mineral Density in Korean Men Bae, Ye Seul Im, Sun-Wha Kang, Mi So Kim, Jin Hee Lee, Soon Hang Cho, Be Long Park, Jin Ho Nam, You-Seon Son, Ho-Young Yang, San Deok Sung, Joohon Oh, Kwang Ho Yun, Jae Moon Kim, Jong Il Genomics Inform Original Article Osteoporosis is a medical condition of global concern, with increasing incidence in both sexes. Bone mineral density (BMD), a highly heritable trait, has been proven a useful diagnostic factor in predicting fracture. Because medical information is lacking about male osteoporotic genetics, we conducted a genome-wide association study of BMD in Korean men. With 1,176 participants, we analyzed 4,414,664 single nucleotide polymorphisms (SNPs) after genomic imputation, and identified five SNPs and three loci correlated with bone density and strength. Multivariate linear regression models were applied to adjust for age and body mass index interference. Rs17124500 (p = 6.42 × 10(-7)), rs34594869 (p = 6.53 × 10(-7)) and rs17124504 (p = 6.53 × 10(-7)) in 14q31.3 and rs140155614 (p = 8.64 × 10(-7)) in 15q25.1 were significantly associated with lumbar spine BMD (LS-BMD), while rs111822233 (p = 6.35 × 10(-7)) was linked with the femur total BMD (FT-BMD). Additionally, we analyzed the relationship between BMD and five genes previously identified in Korean men. Rs61382873 (p = 0.0009) in LRP5, rs9567003 (p = 0.0033) in TNFSF11 and rs9935828 (p = 0.0248) in FOXL1 were observed for LS-BMD. Furthermore, rs33997547 (p = 0.0057) in ZBTB and rs1664496 (p = 0.0012) in MEF2C were found to influence FT-BMD and rs61769193 (p = 0.0114) in ZBTB to influence femur neck BMD. We identified five SNPs and three genomic regions, associated with BMD. The significance of our results lies in the discovery of new loci, while also affirming a previously significant locus, as potential osteoporotic factors in the Korean male population. Korea Genome Organization 2016-06 2016-06-30 /pmc/articles/PMC4951402/ /pubmed/27445649 http://dx.doi.org/10.5808/GI.2016.14.2.62 Text en Copyright © 2016 by the Korea Genome Organization http://creativecommons.org/licenses/by-nc/4.0/ It is identical to the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/). |
spellingShingle | Original Article Bae, Ye Seul Im, Sun-Wha Kang, Mi So Kim, Jin Hee Lee, Soon Hang Cho, Be Long Park, Jin Ho Nam, You-Seon Son, Ho-Young Yang, San Deok Sung, Joohon Oh, Kwang Ho Yun, Jae Moon Kim, Jong Il Genome-Wide Association Study of Bone Mineral Density in Korean Men |
title | Genome-Wide Association Study of Bone Mineral Density in Korean Men |
title_full | Genome-Wide Association Study of Bone Mineral Density in Korean Men |
title_fullStr | Genome-Wide Association Study of Bone Mineral Density in Korean Men |
title_full_unstemmed | Genome-Wide Association Study of Bone Mineral Density in Korean Men |
title_short | Genome-Wide Association Study of Bone Mineral Density in Korean Men |
title_sort | genome-wide association study of bone mineral density in korean men |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4951402/ https://www.ncbi.nlm.nih.gov/pubmed/27445649 http://dx.doi.org/10.5808/GI.2016.14.2.62 |
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