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Improvement of ENU Mutagenesis Efficiency Using Serial Injection and Mismatch Repair Deficiency Mice

ENU mutagenesis is a powerful method for generating novel lines of mice that are informative with respect to both fundamental biological processes and human disease. Rapid developments in genomic technology have made the task of identifying causal mutations by positional cloning remarkably efficient...

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Autores principales: Gallego-Llamas, Jabier, Timms, Andrew E., Pitstick, Rose, Peters, Janet, Carlson, George A., Beier, David R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4956170/
https://www.ncbi.nlm.nih.gov/pubmed/27441645
http://dx.doi.org/10.1371/journal.pone.0159377
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author Gallego-Llamas, Jabier
Timms, Andrew E.
Pitstick, Rose
Peters, Janet
Carlson, George A.
Beier, David R.
author_facet Gallego-Llamas, Jabier
Timms, Andrew E.
Pitstick, Rose
Peters, Janet
Carlson, George A.
Beier, David R.
author_sort Gallego-Llamas, Jabier
collection PubMed
description ENU mutagenesis is a powerful method for generating novel lines of mice that are informative with respect to both fundamental biological processes and human disease. Rapid developments in genomic technology have made the task of identifying causal mutations by positional cloning remarkably efficient. One limitation of this approach remains the mutation frequency achievable using standard treatment protocols, which currently generate approximately 1–2 sequence changes per megabase when optimized. In this study we used two strategies to attempt to increase the number of mutations induced by ENU treatment. One approach employed mice carrying a mutation in the DNA repair enzyme Msh6. The second strategy involved injection of ENU to successive generations of mice. To evaluate the number of ENU-induced mutations, single mice or pooled samples were analyzed using whole exome sequencing. The results showed that there is considerable variability in the induced mutation frequency using these approaches, but an overall increase in ENU-induced variants from one generation to another was observed. The analysis of the mice deficient for Msh6 also showed an increase in the ENU-induced variants compared to the wild-type ENU-treated mice. However, in both cases the increase in ENU-induced mutation frequency was modest.
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spelling pubmed-49561702016-08-08 Improvement of ENU Mutagenesis Efficiency Using Serial Injection and Mismatch Repair Deficiency Mice Gallego-Llamas, Jabier Timms, Andrew E. Pitstick, Rose Peters, Janet Carlson, George A. Beier, David R. PLoS One Research Article ENU mutagenesis is a powerful method for generating novel lines of mice that are informative with respect to both fundamental biological processes and human disease. Rapid developments in genomic technology have made the task of identifying causal mutations by positional cloning remarkably efficient. One limitation of this approach remains the mutation frequency achievable using standard treatment protocols, which currently generate approximately 1–2 sequence changes per megabase when optimized. In this study we used two strategies to attempt to increase the number of mutations induced by ENU treatment. One approach employed mice carrying a mutation in the DNA repair enzyme Msh6. The second strategy involved injection of ENU to successive generations of mice. To evaluate the number of ENU-induced mutations, single mice or pooled samples were analyzed using whole exome sequencing. The results showed that there is considerable variability in the induced mutation frequency using these approaches, but an overall increase in ENU-induced variants from one generation to another was observed. The analysis of the mice deficient for Msh6 also showed an increase in the ENU-induced variants compared to the wild-type ENU-treated mice. However, in both cases the increase in ENU-induced mutation frequency was modest. Public Library of Science 2016-07-21 /pmc/articles/PMC4956170/ /pubmed/27441645 http://dx.doi.org/10.1371/journal.pone.0159377 Text en © 2016 Gallego-Llamas et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Gallego-Llamas, Jabier
Timms, Andrew E.
Pitstick, Rose
Peters, Janet
Carlson, George A.
Beier, David R.
Improvement of ENU Mutagenesis Efficiency Using Serial Injection and Mismatch Repair Deficiency Mice
title Improvement of ENU Mutagenesis Efficiency Using Serial Injection and Mismatch Repair Deficiency Mice
title_full Improvement of ENU Mutagenesis Efficiency Using Serial Injection and Mismatch Repair Deficiency Mice
title_fullStr Improvement of ENU Mutagenesis Efficiency Using Serial Injection and Mismatch Repair Deficiency Mice
title_full_unstemmed Improvement of ENU Mutagenesis Efficiency Using Serial Injection and Mismatch Repair Deficiency Mice
title_short Improvement of ENU Mutagenesis Efficiency Using Serial Injection and Mismatch Repair Deficiency Mice
title_sort improvement of enu mutagenesis efficiency using serial injection and mismatch repair deficiency mice
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4956170/
https://www.ncbi.nlm.nih.gov/pubmed/27441645
http://dx.doi.org/10.1371/journal.pone.0159377
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