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Normalization methods in time series of platelet function assays: A SQUIRE compliant study
Platelet function can be quantitatively assessed by specific assays such as light-transmission aggregometry, multiple-electrode aggregometry measuring the response to adenosine diphosphate (ADP), arachidonic acid, collagen, and thrombin-receptor activating peptide and viscoelastic tests such as rota...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Wolters Kluwer Health
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4956811/ https://www.ncbi.nlm.nih.gov/pubmed/27428217 http://dx.doi.org/10.1097/MD.0000000000004188 |
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author | Van Poucke, Sven Zhang, Zhongheng Roest, Mark Vukicevic, Milan Beran, Maud Lauwereins, Bart Zheng, Ming-Hua Henskens, Yvonne Lancé, Marcus Marcus, Abraham |
author_facet | Van Poucke, Sven Zhang, Zhongheng Roest, Mark Vukicevic, Milan Beran, Maud Lauwereins, Bart Zheng, Ming-Hua Henskens, Yvonne Lancé, Marcus Marcus, Abraham |
author_sort | Van Poucke, Sven |
collection | PubMed |
description | Platelet function can be quantitatively assessed by specific assays such as light-transmission aggregometry, multiple-electrode aggregometry measuring the response to adenosine diphosphate (ADP), arachidonic acid, collagen, and thrombin-receptor activating peptide and viscoelastic tests such as rotational thromboelastometry (ROTEM). The task of extracting meaningful statistical and clinical information from high-dimensional data spaces in temporal multivariate clinical data represented in multivariate time series is complex. Building insightful visualizations for multivariate time series demands adequate usage of normalization techniques. In this article, various methods for data normalization (z-transformation, range transformation, proportion transformation, and interquartile range) are presented and visualized discussing the most suited approach for platelet function data series. Normalization was calculated per assay (test) for all time points and per time point for all tests. Interquartile range, range transformation, and z-transformation demonstrated the correlation as calculated by the Spearman correlation test, when normalized per assay (test) for all time points. When normalizing per time point for all tests, no correlation could be abstracted from the charts as was the case when using all data as 1 dataset for normalization. |
format | Online Article Text |
id | pubmed-4956811 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Wolters Kluwer Health |
record_format | MEDLINE/PubMed |
spelling | pubmed-49568112016-08-02 Normalization methods in time series of platelet function assays: A SQUIRE compliant study Van Poucke, Sven Zhang, Zhongheng Roest, Mark Vukicevic, Milan Beran, Maud Lauwereins, Bart Zheng, Ming-Hua Henskens, Yvonne Lancé, Marcus Marcus, Abraham Medicine (Baltimore) 3700 Platelet function can be quantitatively assessed by specific assays such as light-transmission aggregometry, multiple-electrode aggregometry measuring the response to adenosine diphosphate (ADP), arachidonic acid, collagen, and thrombin-receptor activating peptide and viscoelastic tests such as rotational thromboelastometry (ROTEM). The task of extracting meaningful statistical and clinical information from high-dimensional data spaces in temporal multivariate clinical data represented in multivariate time series is complex. Building insightful visualizations for multivariate time series demands adequate usage of normalization techniques. In this article, various methods for data normalization (z-transformation, range transformation, proportion transformation, and interquartile range) are presented and visualized discussing the most suited approach for platelet function data series. Normalization was calculated per assay (test) for all time points and per time point for all tests. Interquartile range, range transformation, and z-transformation demonstrated the correlation as calculated by the Spearman correlation test, when normalized per assay (test) for all time points. When normalizing per time point for all tests, no correlation could be abstracted from the charts as was the case when using all data as 1 dataset for normalization. Wolters Kluwer Health 2016-07-18 /pmc/articles/PMC4956811/ /pubmed/27428217 http://dx.doi.org/10.1097/MD.0000000000004188 Text en Copyright © 2016 the Author(s). Published by Wolters Kluwer Health, Inc. All rights reserved. http://creativecommons.org/licenses/by/4.0 This is an open access article distributed under the Creative Commons Attribution License 4.0, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. http://creativecommons.org/licenses/by/4.0 |
spellingShingle | 3700 Van Poucke, Sven Zhang, Zhongheng Roest, Mark Vukicevic, Milan Beran, Maud Lauwereins, Bart Zheng, Ming-Hua Henskens, Yvonne Lancé, Marcus Marcus, Abraham Normalization methods in time series of platelet function assays: A SQUIRE compliant study |
title | Normalization methods in time series of platelet function assays: A SQUIRE compliant study |
title_full | Normalization methods in time series of platelet function assays: A SQUIRE compliant study |
title_fullStr | Normalization methods in time series of platelet function assays: A SQUIRE compliant study |
title_full_unstemmed | Normalization methods in time series of platelet function assays: A SQUIRE compliant study |
title_short | Normalization methods in time series of platelet function assays: A SQUIRE compliant study |
title_sort | normalization methods in time series of platelet function assays: a squire compliant study |
topic | 3700 |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4956811/ https://www.ncbi.nlm.nih.gov/pubmed/27428217 http://dx.doi.org/10.1097/MD.0000000000004188 |
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