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Potentially functional polymorphisms in the LIN28B gene contribute to neuroblastoma susceptibility in Chinese children

Neuroblastoma is the most commonly diagnosed solid tumour outside the central nervous system in children. However, genetic factors underlying neuroblastoma remain largely unclear. Previous genome‐wide association study indicated that lin‐28 homolog B (LIN28B) might play an important role in the deve...

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Autores principales: He, Jing, Yang, Tianyou, Zhang, Ruizhong, Zhu, Jinhong, Wang, Fenghua, Zou, Yan, Xia, Huimin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4956938/
https://www.ncbi.nlm.nih.gov/pubmed/27021521
http://dx.doi.org/10.1111/jcmm.12846
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author He, Jing
Yang, Tianyou
Zhang, Ruizhong
Zhu, Jinhong
Wang, Fenghua
Zou, Yan
Xia, Huimin
author_facet He, Jing
Yang, Tianyou
Zhang, Ruizhong
Zhu, Jinhong
Wang, Fenghua
Zou, Yan
Xia, Huimin
author_sort He, Jing
collection PubMed
description Neuroblastoma is the most commonly diagnosed solid tumour outside the central nervous system in children. However, genetic factors underlying neuroblastoma remain largely unclear. Previous genome‐wide association study indicated that lin‐28 homolog B (LIN28B) might play an important role in the development of neuroblastoma and also contributed to its poor overall survival. With the purpose to evaluate the association between LIN28B gene polymorphisms and neuroblastoma susceptibility in Southern Chinese population, we conducted this study with 256 neuroblastoma cases and 531 cancer‐free controls. Four potentially functional polymorphisms (rs221634 A>T, rs221635 T>C, rs314276 C>A and rs9404590 T>G) were genotyped using Taqman method. Odds ratios (ORs) and 95% confidence intervals (CIs) were calculated to assess the associations between the selected single nucleotide polymorphisms (SNPs) and neuroblastoma susceptibility. We also performed genotype‐phenotype association analysis to explore the effects of the selected SNPs on LIN28B gene transcripts. Our results indicated that the rs221634 TT genotype was associated with an increased neuroblastoma risk (TT versus AA/AT: adjusted OR = 1.50, 95% CI = 1.04–2.17). The association was more pronounced in males, patients with tumour of mediastinum origin, as well as patients in early clinical stages. Moreover, overall analysis and stratified analysis also showed an increased risk of neuroblastoma for carrier of the 2–4 risk genotypes. In summary, these results indicated that the LIN28B rs221634 A>T polymorphism was associated with an increased neuroblastoma risk in Southern Chinese children. These findings need further validation in large studies with different ethnicities involved.
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spelling pubmed-49569382016-08-03 Potentially functional polymorphisms in the LIN28B gene contribute to neuroblastoma susceptibility in Chinese children He, Jing Yang, Tianyou Zhang, Ruizhong Zhu, Jinhong Wang, Fenghua Zou, Yan Xia, Huimin J Cell Mol Med Original Articles Neuroblastoma is the most commonly diagnosed solid tumour outside the central nervous system in children. However, genetic factors underlying neuroblastoma remain largely unclear. Previous genome‐wide association study indicated that lin‐28 homolog B (LIN28B) might play an important role in the development of neuroblastoma and also contributed to its poor overall survival. With the purpose to evaluate the association between LIN28B gene polymorphisms and neuroblastoma susceptibility in Southern Chinese population, we conducted this study with 256 neuroblastoma cases and 531 cancer‐free controls. Four potentially functional polymorphisms (rs221634 A>T, rs221635 T>C, rs314276 C>A and rs9404590 T>G) were genotyped using Taqman method. Odds ratios (ORs) and 95% confidence intervals (CIs) were calculated to assess the associations between the selected single nucleotide polymorphisms (SNPs) and neuroblastoma susceptibility. We also performed genotype‐phenotype association analysis to explore the effects of the selected SNPs on LIN28B gene transcripts. Our results indicated that the rs221634 TT genotype was associated with an increased neuroblastoma risk (TT versus AA/AT: adjusted OR = 1.50, 95% CI = 1.04–2.17). The association was more pronounced in males, patients with tumour of mediastinum origin, as well as patients in early clinical stages. Moreover, overall analysis and stratified analysis also showed an increased risk of neuroblastoma for carrier of the 2–4 risk genotypes. In summary, these results indicated that the LIN28B rs221634 A>T polymorphism was associated with an increased neuroblastoma risk in Southern Chinese children. These findings need further validation in large studies with different ethnicities involved. John Wiley and Sons Inc. 2016-03-29 2016-08 /pmc/articles/PMC4956938/ /pubmed/27021521 http://dx.doi.org/10.1111/jcmm.12846 Text en © 2016 The Authors. Journal of Cellular and Molecular Medicine published by John Wiley & Sons Ltd and Foundation for Cellular and Molecular Medicine. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
He, Jing
Yang, Tianyou
Zhang, Ruizhong
Zhu, Jinhong
Wang, Fenghua
Zou, Yan
Xia, Huimin
Potentially functional polymorphisms in the LIN28B gene contribute to neuroblastoma susceptibility in Chinese children
title Potentially functional polymorphisms in the LIN28B gene contribute to neuroblastoma susceptibility in Chinese children
title_full Potentially functional polymorphisms in the LIN28B gene contribute to neuroblastoma susceptibility in Chinese children
title_fullStr Potentially functional polymorphisms in the LIN28B gene contribute to neuroblastoma susceptibility in Chinese children
title_full_unstemmed Potentially functional polymorphisms in the LIN28B gene contribute to neuroblastoma susceptibility in Chinese children
title_short Potentially functional polymorphisms in the LIN28B gene contribute to neuroblastoma susceptibility in Chinese children
title_sort potentially functional polymorphisms in the lin28b gene contribute to neuroblastoma susceptibility in chinese children
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4956938/
https://www.ncbi.nlm.nih.gov/pubmed/27021521
http://dx.doi.org/10.1111/jcmm.12846
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