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Predicting the international spread of Middle East respiratory syndrome (MERS)

BACKGROUND: The Middle East respiratory syndrome (MERS) associated coronavirus has been imported via travelers into multiple countries around the world. In order to support risk assessment practice, the present study aimed to devise a novel statistical model to quantify the country-level risk of exp...

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Autores principales: Nah, Kyeongah, Otsuki, Shiori, Chowell, Gerardo, Nishiura, Hiroshi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4957429/
https://www.ncbi.nlm.nih.gov/pubmed/27449387
http://dx.doi.org/10.1186/s12879-016-1675-z
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author Nah, Kyeongah
Otsuki, Shiori
Chowell, Gerardo
Nishiura, Hiroshi
author_facet Nah, Kyeongah
Otsuki, Shiori
Chowell, Gerardo
Nishiura, Hiroshi
author_sort Nah, Kyeongah
collection PubMed
description BACKGROUND: The Middle East respiratory syndrome (MERS) associated coronavirus has been imported via travelers into multiple countries around the world. In order to support risk assessment practice, the present study aimed to devise a novel statistical model to quantify the country-level risk of experiencing an importation of MERS case. METHODS: We analyzed the arrival time of each reported MERS importation around the world, i.e., the date on which imported cases entered a specific country, which was modeled as a dependent variable in our analysis. We also used openly accessible data including the airline transportation network to parameterize a hazard-based risk prediction model. The hazard was assumed to follow an inverse function of the effective distance (i.e., the minimum effective length of a path from origin to destination), which was calculated from the airline transportation data, from Saudi Arabia to each country. Both country-specific religion and the incidence data of MERS in Saudi Arabia were used to improve our model prediction. RESULTS: Our estimates of the risk of MERS importation appeared to be right skewed, which facilitated the visual identification of countries at highest risk of MERS importations in the right tail of the distribution. The simplest model that relied solely on the effective distance yielded the best predictive performance (Area under the curve (AUC) = 0.943) with 100 % sensitivity and 79.6 % specificity. Out of the 30 countries estimated to be at highest risk of MERS case importation, 17 countries (56.7 %) have already reported at least one importation of MERS. Although model fit measured by Akaike Information Criterion (AIC) was improved by including country-specific religion (i.e. Muslim majority country), the predictive performance as measured by AUC was not improved after accounting for this covariate. CONCLUSIONS: Our relatively simple statistical model based on the effective distance derived from the airline transportation network data was found to help predicting the risk of importing MERS at the country level. The successful application of the effective distance model to predict MERS importations, particularly when computationally intensive large-scale transmission models may not be immediately applicable could have been benefited from the particularly low transmissibility of the MERS coronavirus.
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spelling pubmed-49574292016-07-26 Predicting the international spread of Middle East respiratory syndrome (MERS) Nah, Kyeongah Otsuki, Shiori Chowell, Gerardo Nishiura, Hiroshi BMC Infect Dis Research Article BACKGROUND: The Middle East respiratory syndrome (MERS) associated coronavirus has been imported via travelers into multiple countries around the world. In order to support risk assessment practice, the present study aimed to devise a novel statistical model to quantify the country-level risk of experiencing an importation of MERS case. METHODS: We analyzed the arrival time of each reported MERS importation around the world, i.e., the date on which imported cases entered a specific country, which was modeled as a dependent variable in our analysis. We also used openly accessible data including the airline transportation network to parameterize a hazard-based risk prediction model. The hazard was assumed to follow an inverse function of the effective distance (i.e., the minimum effective length of a path from origin to destination), which was calculated from the airline transportation data, from Saudi Arabia to each country. Both country-specific religion and the incidence data of MERS in Saudi Arabia were used to improve our model prediction. RESULTS: Our estimates of the risk of MERS importation appeared to be right skewed, which facilitated the visual identification of countries at highest risk of MERS importations in the right tail of the distribution. The simplest model that relied solely on the effective distance yielded the best predictive performance (Area under the curve (AUC) = 0.943) with 100 % sensitivity and 79.6 % specificity. Out of the 30 countries estimated to be at highest risk of MERS case importation, 17 countries (56.7 %) have already reported at least one importation of MERS. Although model fit measured by Akaike Information Criterion (AIC) was improved by including country-specific religion (i.e. Muslim majority country), the predictive performance as measured by AUC was not improved after accounting for this covariate. CONCLUSIONS: Our relatively simple statistical model based on the effective distance derived from the airline transportation network data was found to help predicting the risk of importing MERS at the country level. The successful application of the effective distance model to predict MERS importations, particularly when computationally intensive large-scale transmission models may not be immediately applicable could have been benefited from the particularly low transmissibility of the MERS coronavirus. BioMed Central 2016-07-22 /pmc/articles/PMC4957429/ /pubmed/27449387 http://dx.doi.org/10.1186/s12879-016-1675-z Text en © The Author(s). 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Nah, Kyeongah
Otsuki, Shiori
Chowell, Gerardo
Nishiura, Hiroshi
Predicting the international spread of Middle East respiratory syndrome (MERS)
title Predicting the international spread of Middle East respiratory syndrome (MERS)
title_full Predicting the international spread of Middle East respiratory syndrome (MERS)
title_fullStr Predicting the international spread of Middle East respiratory syndrome (MERS)
title_full_unstemmed Predicting the international spread of Middle East respiratory syndrome (MERS)
title_short Predicting the international spread of Middle East respiratory syndrome (MERS)
title_sort predicting the international spread of middle east respiratory syndrome (mers)
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4957429/
https://www.ncbi.nlm.nih.gov/pubmed/27449387
http://dx.doi.org/10.1186/s12879-016-1675-z
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